RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 SNRNP25Q9BV90 132 aaKnown RBP14.31□□□□□ -0.12
CIITA-213ENST00000618327 NDUFS3O75489 264 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 FAM153BP0C7A2 387 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 CYP3A5P20815 502 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 PRMT2P55345 433 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 TAS2R40P59535 323 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 SLC12A1Q13621 1099 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 FAM153CQ494X1 144 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 ARL8AQ96BM9 186 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
CIITA-213ENST00000618327 FAM153AQ9UHL3 310 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 NOCTQ9UK39 431 aaKnown RBP14.31□□□□□ -0.12
CIITA-213ENST00000618327 TRIM49D1C9J1S8 452 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 H0Y3Z8 333 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 EIF3HO15372 352 aaKnown RBP eCLIP14.31□□□□□ -0.12
CIITA-213ENST00000618327 ZNF135P52742 658 aaPredicted RBP14.31□□□□□ -0.12
CIITA-213ENST00000618327 PTK6Q13882 451 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 TFAP2DQ7Z6R9 452 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 PRELID2Q8N945 189 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 TSPAN17Q96FV3 270 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 CEP41Q9BYV8 373 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 YIPF3Q9GZM5 350 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 ERBB2P04626 1255 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 RHOCP08134 193 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 AVPR1AP37288 418 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 SLC39A4Q6P5W5 647 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TMC3Q7Z5M5 1100 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 LZTR1Q8N653 840 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TRIML2Q8N7C3 387 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 JOSD2Q8TAC2 188 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 ZNF516Q92618 1163 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 LRRC37BQ96QE4 947 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 PCYT2Q99447 389 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 BRD8Q9H0E9 1235 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 RBM22Q9NW64 420 aaKnown RBP eCLIP14.3□□□□□ -0.12
CIITA-213ENST00000618327 SRRDQ9UH36 339 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 VNN1O95497 513 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 PECAM1P16284 738 aaPredicted RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 KLRC2P26717 231 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 NUMBP49757 651 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 POU5F1Q01860 360 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 MTA1Q13330 715 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 ANKS3Q6ZW76 656 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 LRRC8DQ7L1W4 858 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TMEM199Q8N511 208 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 AENQ8WTP8 325 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 DDI1Q8WTU0 396 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 ELMO2Q96JJ3 720 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 ZMAT2Q96NC0 199 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 LRRC40Q9H9A6 602 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TRMT13Q9NUP7 481 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 PCDHGC3Q9UN70 934 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 CARNS1A5YM72 827 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 EEF1B2P24534 225 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 MRPS5P82675 430 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 HERC6Q8IVU3 1022 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TMEM192Q8IY95 271 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 CARNMT1Q8N4J0 409 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 CCT8L2Q96SF2 557 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TMEM51Q9NW97 253 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 KCNK1O00180 336 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 MYL4P12829 197 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 LSP1P33241 339 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 OCRLQ01968 901 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 MON1BQ7L1V2 547 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
CIITA-213ENST00000618327 GPR63Q9BZJ6 419 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 FAM124BQ9H5Z6 455 aaPredicted RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 TMBIM4Q9HC24 238 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 SMPD4Q9NXE4 827 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 MARCH2Q9P0N8 246 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 STOML1Q9UBI4 398 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 OR12D3Q9UGF7 316 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 PCYOX1Q9UHG3 505 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 SALL4Q9UJQ4 1053 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 AJAP1Q9UKB5 411 aaPredicted RBP14.3□□□□□ -0.12
CIITA-213ENST00000618327 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
CIITA-213ENST00000618327 DIAPH2O60879 1101 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 RAMP2O60895 175 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 CAND2O75155 1236 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 RBL1P28749 1068 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 MATKP42679 507 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 ACTN3Q08043 901 aaPredicted RBP14.29□□□□□ -0.12
CIITA-213ENST00000618327 SKIV2LQ15477 1246 aaKnown RBP14.29□□□□□ -0.12
CIITA-213ENST00000618327 CDCA2Q69YH5 1023 aaPredicted RBP14.29□□□□□ -0.12
CIITA-213ENST00000618327 SLC4A11Q8NBS3 891 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 CNGB3Q9NQW8 809 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 FGFR1OP2Q9NVK5 253 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 GTF2IRD1Q9UHL9 959 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 ZFP69BQ9UJL9 534 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 HACD1B0YJ81 288 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 F2P00734 622 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 ACLYP53396 1101 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 IL1RL1Q01638 556 aa14.29□□□□□ -0.12
CIITA-213ENST00000618327 BLOC1S5Q8TDH9 187 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms