RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 RNF38Q9H0F5 515 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 ATXN3LQ9H3M9 355 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 KLHL11Q9NVR0 708 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 TMEM51Q9NW97 253 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.39□□□□□ -1.07
TARDBP-219ENST00000617757 ARHGEF38Q9NXL2 777 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 DDX56Q9NY93 547 aaKnown RBP8.39□□□□□ -1.07
TARDBP-219ENST00000617757 MARCH2Q9P0N8 246 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 RASAL2Q9UJF2 1139 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 FZD10Q9ULW2 581 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 TLR6Q9Y2C9 796 aa8.39□□□□□ -1.07
TARDBP-219ENST00000617757 SPTBN5Q9NRC6 3674 aaKnown RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 KCNU1A8MYU2 1149 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 I6L893 689 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF185O15231 689 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 COCHO43405 550 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 URI1O94763 535 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ZRANB2O95218 330 aaKnown RBP eCLIP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 OLFM2O95897 454 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 PYGMP11217 842 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 KDELR1P24390 212 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CCR1P32246 355 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ADRA1BP35368 520 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ARSEP51690 589 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 TBX4P57082 545 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF211Q13398 564 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 PPP2R5DQ14738 602 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CA9Q16790 459 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 SLC5A9Q2M3M2 681 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CTC1Q2NKJ3 1217 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 SMTNL2Q2TAL5 461 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ARL13BQ3SXY8 428 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 BRMS1LQ5PSV4 323 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 AADACL2Q6P093 401 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 SYCE2Q6PIF2 218 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 PDZD4Q76G19 769 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 MIB1Q86YT6 1006 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 RCOR2Q8IZ40 523 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 MAB21L3Q8N8X9 362 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 EXD1Q8NHP7 514 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 FAM71BQ8TC56 605 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 COG1Q8WTW3 980 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 RAPGEF5Q92565 580 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 HSPH1Q92598 858 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 MRPS31Q92665 395 aaKnown RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 RNF34Q969K3 372 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 RNF25Q96BH1 459 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ACSF2Q96CM8 615 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 TCEAL4Q96EI5 215 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 FCRL2Q96LA5 508 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 SLC22A12Q96S37 553 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CYP2S1Q96SQ9 504 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 KLF16Q9BXK1 252 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 SLC46A2Q9BY10 475 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 MAGEB5Q9BZ81 275 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 NACA2Q9H009 215 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 TKTL2Q9H0I9 626 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CARD9Q9H257 536 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 WDCPQ9H6R7 721 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 TRPC7Q9HCX4 862 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 GPATCH2LQ9NWQ4 482 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CLEC1BQ9P126 229 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 DNMT3LQ9UJW3 386 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 CDC23Q9UJX2 597 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
TARDBP-219ENST00000617757 HBS1LQ9Y450 684 aaKnown RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 KIF26AQ9ULI4 1882 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-219ENST00000617757 C3orf70A6NLC5 250 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-219ENST00000617757 SOBPA7XYQ1 873 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 PI4K2BG5E9Z4 385 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF197O14709 1029 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 CEP104O60308 925 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 IGLV3-27P01718 113 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 KRT1P04264 644 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 HMBSP08397 361 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 CD48P09326 243 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 SLC2A3P11169 496 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 MBL2P11226 248 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-219ENST00000617757 PFKLP17858 780 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 HDCP19113 662 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 IGFBP4P22692 258 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 DDX6P26196 483 aaKnown RBP eCLIP8.37□□□□□ -1.07
TARDBP-219ENST00000617757 L1CAMP32004 1257 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 KPNA1P52294 538 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-219ENST00000617757 CDH6P55285 790 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 COPS2P61201 443 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 COG7P83436 770 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 RING1Q06587 406 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 SCAPQ12770 1279 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 TUBB2AQ13885 445 aa8.37□□□□□ -1.07
TARDBP-219ENST00000617757 PDK2Q15119 407 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms