RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MSX2P35548 267 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PRAMEP78395 509 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MMEL1Q495T6 779 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 TAF1BQ53T94 588 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 C9orf57Q5W0N0 161 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PTAR1Q7Z6K3 402 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PPTC7Q8NI37 304 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 KLHL5Q96PQ7 755 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 NCAPGQ9BPX3 1015 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 EVPLQ92817 2033 aa15.3■□□□□ 0.04
TNFRSF11A-206ENST00000617039 RP1L1Q8IWN7 2480 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 BTNL10A8MVZ5 291 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MEI4A8MW99 385 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CLGNO14967 610 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 TBX18O95935 607 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 DARSP14868 501 aaKnown RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 RPL17P18621 184 aaKnown RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 GRK4P32298 578 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ALLCQ8N6M5 410 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CPT1BQ92523 772 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 OMDQ99983 421 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 IL1RL2Q9HB29 575 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PCDH9Q9HC56 1237 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PFDN4Q9NQP4 134 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MYADML2A6NDP7 307 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ICAM3P32942 547 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ZNF143P52747 638 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PPM1JQ5JR12 505 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 EFHC1Q5JVL4 640 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 LDB1Q86U70 411 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 LONP2Q86WA8 852 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CACUL1Q86Y37 369 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CFAP52Q8N1V2 620 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ATPAF2Q8N5M1 289 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 RSRC1Q96IZ7 334 aaKnown RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ZBED2Q9BTP6 218 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CCDC68Q9H2F9 335 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 FAM237BA0A1B0GVD1 139 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 APOC4-APOC2K7ER74 178 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 APOC2P02655 101 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ECHS1P30084 290 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 GPD2P43304 727 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 IQSEC1Q6DN90 963 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CHSY1Q86X52 802 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 N4BP2L2Q92802 583 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 APBA2Q99767 749 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 NT5MQ9NPB1 228 aa15.29■□□□□ 0.04
TNFRSF11A-206ENST00000617039 TCRBV9S1A1TA0A576 114 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 YJEFN3A6XGL0 299 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 E7ENQ6 273 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 B4GALT4O60513 344 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 BEST1O76090 585 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ASGR1P07306 291 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 RTP1P59025 263 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MORF4L2Q15014 288 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PDCD2Q16342 344 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 DCAF4L1Q3SXM0 396 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 NLRP9Q7RTR0 991 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CIR1Q86X95 450 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MPP5Q8N3R9 675 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 HTR3CQ8WXA8 447 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 MARK4Q96L34 752 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SH3GL2Q99962 352 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PCDH18Q9HCL0 1135 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 OR12D3Q9UGF7 316 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SSX2IPQ9Y2D8 614 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 NRCAMQ92823 1304 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 E9PBE3 544 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 DNM1LO00429 736 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 KLHL41O60662 606 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 LYPLA1O75608 230 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SNRPAP09012 282 aaKnown RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ERCC2P18074 760 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SERPINB3P29508 390 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 LILRA4P59901 499 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 COPS2P61201 443 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CRHR2Q13324 411 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PRPF39Q86UA1 669 aaKnown RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SPATA22Q8NHS9 363 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 NUDCD1Q96RS6 583 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PEBP4Q96S96 227 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SHOC2Q9UQ13 582 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 N4BP2Q86UW6 1770 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 B2RBV5 119 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 AIM2O14862 343 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 AOC2O75106 756 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 STBD1O95210 358 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 VAPBO95292 243 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ELF1P32519 619 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 SOX4Q06945 474 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 ITGA9Q13797 1035 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 CYB5D1Q6P9G0 228 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 STRA8Q7Z7C7 330 aa15.28■□□□□ 0.04
TNFRSF11A-206ENST00000617039 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms