RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 USP17L7P0C7H9 530 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 ODC1P11926 461 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 GOT1P17174 413 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 SLC18A1P54219 525 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 DAOAP59103 153 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 PDIA2Q13087 525 aaKnown RBP19.83■□□□□ 0.76
MMP28-204ENST00000615136 XRCC4Q13426 336 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 RAB41Q5JT25 222 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 CLLU1OSQ5K130 101 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 NUGGCQ68CJ6 796 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 BHLHA9Q7RTU4 235 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 SLC43A3Q8NBI5 491 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 GDAP1Q8TB36 358 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 RSPH1Q8WYR4 309 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 SLC2A13Q96QE2 648 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 VPS37BQ9H9H4 285 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 ANLNQ9NQW6 1124 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 RGS18Q9NS28 235 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 PIGVQ9NUD9 493 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 SENP1Q9P0U3 644 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 SLC24A2Q9UI40 661 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 FZD10Q9ULW2 581 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 USP3Q9Y6I4 520 aa19.83■□□□□ 0.76
MMP28-204ENST00000615136 M0QYT0 321 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 M0QZQ0 153 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 SMAPO00193 183 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 PRPF4O43172 522 aaKnown RBP eCLIP19.82■□□□□ 0.76
MMP28-204ENST00000615136 DESP17661 470 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 TGM2P21980 687 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 AMPD1P23109 780 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 NOS2P35228 1153 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 NME3Q13232 169 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 ANKMY2Q8IV38 441 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 TGS1Q96RS0 853 aaKnown RBP19.82■□□□□ 0.76
MMP28-204ENST00000615136 PKMYT1Q99640 499 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 STARD7Q9NQZ5 370 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.82■□□□□ 0.76
MMP28-204ENST00000615136 FETUBQ9UGM5 382 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 NR2E3Q9Y5X4 410 aa19.82■□□□□ 0.76
MMP28-204ENST00000615136 E7ESA3 106 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 I6L893 689 aaPredicted RBP19.81■□□□□ 0.76
MMP28-204ENST00000615136 KCNN4O15554 427 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 CYP11A1P05108 521 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 BDNFP23560 247 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 VEGFBP49765 207 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 BASP1P80723 227 aaKnown RBP19.81■□□□□ 0.76
MMP28-204ENST00000615136 EFHC2Q5JST6 749 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 FAM171BQ6P995 826 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 NCAPGQ9BPX3 1015 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 POPDC2Q9HBU9 364 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 SQORQ9Y6N5 450 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 CLUHO75153 1309 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 SUN1O94901 812 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 PCSK1P29120 753 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 RDXP35241 583 aaKnown RBP19.81■□□□□ 0.76
MMP28-204ENST00000615136 ARL4CP56559 192 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 GPX6P59796 221 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 INTS6LQ5JSJ4 861 aaKnown RBP19.81■□□□□ 0.76
MMP28-204ENST00000615136 VSIG1Q86XK7 387 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 ACBD6Q9BR61 282 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 HMX1Q9NP08 348 aaPredicted RBP19.81■□□□□ 0.76
MMP28-204ENST00000615136 ZMYND8Q9ULU4 1186 aaPredicted RBP19.81■□□□□ 0.76
MMP28-204ENST00000615136 PTCH2Q9Y6C5 1203 aa19.81■□□□□ 0.76
MMP28-204ENST00000615136 POC1B-GALNT4F8VUJ3 575 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 STIP1P31948 543 aaKnown RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 WDR4P57081 412 aaKnown RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 NCBP2-AS2Q69YL0 99 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 SPATA21Q7Z572 469 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 ATP11CQ8NB49 1132 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 DENND1AQ8TEH3 1009 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 ZNF296Q8WUU4 475 aaPredicted RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 SMARCD1Q96GM5 515 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 TSEN34Q9BSV6 310 aaKnown RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 CSNK1G1Q9HCP0 422 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 ABCF3Q9NUQ8 709 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 PSMC3IPQ9P2W1 217 aaPredicted RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 NLRC5Q86WI3 1866 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 ASMTLO95671 621 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 APLP1P51693 650 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 IL9RQ01113 521 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 SF3A3Q12874 501 aaKnown RBP eCLIP19.8■□□□□ 0.76
MMP28-204ENST00000615136 FAXCQ5TGI0 409 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 SLC7A14Q8TBB6 771 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 EDEM1Q92611 657 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 PLCD4Q9BRC7 762 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 TRABDQ9H4I3 376 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 KLC4Q9NSK0 619 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 HAUS2Q9NVX0 235 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 PRKAG3Q9UGI9 489 aa19.8■□□□□ 0.76
MMP28-204ENST00000615136 XPO7Q9UIA9 1087 aaKnown RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 SMG5Q9UPR3 1016 aaKnown RBP19.8■□□□□ 0.76
MMP28-204ENST00000615136 ZNF487B1APH4 448 aa19.79■□□□□ 0.76
MMP28-204ENST00000615136 INPPL1O15357 1258 aa19.79■□□□□ 0.76
MMP28-204ENST00000615136 MYCP01106 439 aaPredicted RBP19.79■□□□□ 0.76
MMP28-204ENST00000615136 SKIP12755 728 aa19.79■□□□□ 0.76
MMP28-204ENST00000615136 TAC1P20366 129 aa19.79■□□□□ 0.76
MMP28-204ENST00000615136 GPNMBQ14956 572 aa19.79■□□□□ 0.76
MMP28-204ENST00000615136 PKN2Q16513 984 aaKnown RBP19.79■□□□□ 0.76
MMP28-204ENST00000615136 OVOS1Q6IE37 1185 aa19.79■□□□□ 0.76
MMP28-204ENST00000615136 CGB2Q6NT52 195 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms