RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 C18orf8Q96DM3 657 aa13.41□□□□□ -0.26
CCL4-201ENST00000613947 KLF16Q9BXK1 252 aaPredicted RBP13.41□□□□□ -0.26
CCL4-201ENST00000613947 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
CCL4-201ENST00000613947 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
CCL4-201ENST00000613947 A6NNZ2 444 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 SCAMP3O14828 347 aaKnown RBP13.4□□□□□ -0.26
CCL4-201ENST00000613947 ZNF263O14978 683 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 TNFAIP3P21580 790 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 VSNL1P62760 191 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
CCL4-201ENST00000613947 USP4Q13107 963 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 TRIM14Q14142 442 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 MTF1Q14872 753 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 CLEC16AQ2KHT3 1053 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 TUBB8Q3ZCM7 444 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 IER5LQ5T953 404 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 OLFML1Q6UWY5 402 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 TMTC1Q8IUR5 882 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 RNF139Q8WU17 664 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 WBP2Q969T9 261 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 ASIC4Q96FT7 647 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 SLC2A4RGQ9NR83 387 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 CFAP97Q9P2B7 532 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 NAALADL1Q9UQQ1 740 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 DLL1O00548 723 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 CHADO15335 359 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 GRAP2O75791 330 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 NCAM1P13591 858 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 TCF3P15923 654 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 MMP8P22894 467 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 NSFP46459 744 aaKnown RBP13.4□□□□□ -0.26
CCL4-201ENST00000613947 SLC6A3Q01959 620 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 CENPCQ03188 943 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
CCL4-201ENST00000613947 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 CCDC91Q7Z6B0 441 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 XYLT1Q86Y38 959 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 RUBCNQ92622 972 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 IRF7Q92985 503 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 FAM83CQ9BQN1 747 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 EPHX3Q9H6B9 360 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 THG1LQ9NWX6 298 aaKnown RBP13.4□□□□□ -0.26
CCL4-201ENST00000613947 MARCH2Q9P0N8 246 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 SFMBT1Q9UHJ3 866 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
CCL4-201ENST00000613947 HELZP42694 1942 aaKnown RBP13.39□□□□□ -0.27
CCL4-201ENST00000613947 ARNTLO00327 626 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCL4-201ENST00000613947 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
CCL4-201ENST00000613947 IRF1P10914 325 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
CCL4-201ENST00000613947 TNK2Q07912 1038 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 ZNF569Q5MCW4 686 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 SYPL2Q5VXT5 272 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 TRIM68Q6AZZ1 485 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 PHLDB2Q86SQ0 1253 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
CCL4-201ENST00000613947 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 GTSE1Q9NYZ3 720 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 BZW2Q9Y6E2 419 aaKnown RBP13.39□□□□□ -0.27
CCL4-201ENST00000613947 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
CCL4-201ENST00000613947 ATXN2Q99700 1313 aaKnown RBP13.39□□□□□ -0.27
CCL4-201ENST00000613947 CAPN9O14815 690 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 GREM1O60565 184 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 MFAP3LO75121 409 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 SERPING1P05155 500 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 GLI1P08151 1106 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
CCL4-201ENST00000613947 COG7P83436 770 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 AMPD2Q01433 879 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 PFKPQ01813 784 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 SIGLEC14Q08ET2 396 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 PTP4A2Q12974 167 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
CCL4-201ENST00000613947 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 BEND5Q7L4P6 421 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 DDX42Q86XP3 938 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCL4-201ENST00000613947 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
CCL4-201ENST00000613947 OSCP1Q8WVF1 389 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 TACO1Q9BSH4 297 aaKnown RBP13.38□□□□□ -0.27
CCL4-201ENST00000613947 DESI2Q9BSY9 194 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 ASNSD1Q9NWL6 643 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 DUS2Q9NX74 493 aaKnown RBP13.38□□□□□ -0.27
CCL4-201ENST00000613947 ADAM22Q9P0K1 906 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 FBXL21Q9UKT6 434 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 STRIP2Q9ULQ0 834 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 SH3BP1Q9Y3L3 701 aa13.38□□□□□ -0.27
CCL4-201ENST00000613947 SLC12A8A0AV02 714 aa13.37□□□□□ -0.27
CCL4-201ENST00000613947 E2F8A0AVK6 867 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms