RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 DDX50Q9BQ39 737 aaKnown RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 MFSD1Q9H3U5 465 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 HEBP1Q9NRV9 189 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.2
MDC1-209ENST00000613547 GTSE1Q9NYZ3 720 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 CA14Q9ULX7 337 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 PIAS3Q9Y6X2 628 aa13.81□□□□□ -0.2
MDC1-209ENST00000613547 ZNF638Q14966 1978 aaKnown RBP13.81□□□□□ -0.2
MDC1-209ENST00000613547 SYNJ2BP-COX16A0A087WUM0 186 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 MAN2B1O00754 1011 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 ARSAP15289 507 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 PDGFRAP16234 1089 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 ABCB4P21439 1286 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 CCR1P32246 355 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 GFPT1Q06210 699 aaPredicted RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 TNK2Q07912 1038 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 MLF2Q15773 248 aaPredicted RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 Q6ZNB5 142 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 RALGPS2Q86X27 583 aaPredicted RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 ADGRG2Q8IZP9 1017 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 EMC1Q8N766 993 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 NPY6RQ99463 290 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 CHP1Q99653 195 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 LINC00597Q9H2U6 94 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 MRPL47Q9HD33 250 aaKnown RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 COX16Q9P0S2 106 aa13.8□□□□□ -0.2
MDC1-209ENST00000613547 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 AGO1Q9UL18 857 aaKnown RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 MRPS17Q9Y2R5 130 aaKnown RBP13.8□□□□□ -0.2
MDC1-209ENST00000613547 TMEM221A6NGB7 291 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 M0R296 226 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 DLL1O00548 723 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 GREM1O60565 184 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 IGLV3-25P01717 112 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 IGLV3-27P01718 113 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 KLKB1P03952 638 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 CYBBP04839 570 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 GPD1P21695 349 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 RFC1P35251 1148 aaPredicted RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 CYLC1P35663 651 aaPredicted RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 PTPN9P43378 593 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 MRE11P49959 708 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 GSDMDP57764 484 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 GAD2Q05329 585 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 PLEKHA7Q6IQ23 1121 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 TPRG1Q6ZUI0 275 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 ATP6V0D2Q8N8Y2 350 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 JOSD2Q8TAC2 188 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 RXFP2Q8WXD0 754 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 CTNNBL1Q8WYA6 563 aaPredicted RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 NT5C3BQ969T7 300 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 WBP2Q969T9 261 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 AZIN2Q96A70 460 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 PGAP3Q96FM1 320 aaPredicted RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 SLC39A13Q96H72 371 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 FCRL2Q96LA5 508 aaPredicted RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 CFAP57Q96MR6 1250 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 TBCBQ99426 244 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 LUC7LQ9NQ29 371 aaKnown RBP13.79□□□□□ -0.2
MDC1-209ENST00000613547 SPHK2Q9NRA0 654 aa13.79□□□□□ -0.2
MDC1-209ENST00000613547 DENND4CQ5VZ89 1909 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ANAPC1Q9H1A4 1944 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 C2CD4BA6NLJ0 364 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 SPECC1L-ADORA2AF8WAN1 911 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 STK25O00506 426 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ACSL4O60488 711 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
MDC1-209ENST00000613547 MOCS2O96007 188 aaPredicted RBP13.78□□□□□ -0.2
MDC1-209ENST00000613547 CYP17A1P05093 508 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ADH5P11766 374 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 PITX1P78337 314 aaPredicted RBP13.78□□□□□ -0.2
MDC1-209ENST00000613547 MAMLD1Q13495 774 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 PPP2R5DQ14738 602 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 DHCR24Q15392 516 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ASTE1Q2TB18 679 aaPredicted RBP13.78□□□□□ -0.2
MDC1-209ENST00000613547 ANO4Q32M45 955 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
MDC1-209ENST00000613547 BRMS1LQ5PSV4 323 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 LY6G5CQ5SRR4 150 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 C10orf76Q5T2E6 689 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ADGRF1Q5T601 910 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 ZNF852Q6ZMS4 543 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 TMTC1Q8IUR5 882 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 CCDC170Q8IYT3 715 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 CPXM2Q8N436 756 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 BTN2A3PQ96KV6 586 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 NELL2Q99435 816 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 CNPY3Q9BT09 278 aa13.78□□□□□ -0.2
MDC1-209ENST00000613547 IRX2Q9BZI1 471 aaPredicted RBP13.78□□□□□ -0.2
MDC1-209ENST00000613547 WDCPQ9H6R7 721 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms