RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 LGMNQ99538 433 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FGFBP2Q9BYJ0 223 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TENM4Q6N022 2769 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 MDM4O15151 490 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PHACTR2O75167 634 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PENKP01210 267 aaPredicted RBP16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 DNTTP04053 509 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 RARGP13631 454 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TXLNAP40222 546 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 MYL6P60660 151 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 RHDQ02161 417 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SNRNP35Q16560 246 aaKnown RBP16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 KCNT1Q5JUK3 1230 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PCSK4Q6UW60 755 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SPACA3Q8IXA5 215 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CGRRF1Q99675 332 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SMOQ99835 787 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 NUDT5Q9UKK9 219 aa16.18■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 GOLGA4Q13439 2230 aaKnown RBP16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CBX4O00257 560 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CYP26A1O43174 497 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TIMM44O43615 452 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 BRINP1O60477 761 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TSPAN3O60637 253 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 STC2O76061 302 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 STAU1O95793 577 aaKnown RBP16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CCDC130P13994 396 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TRIM21P19474 475 aaKnown RBP16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 RACK1P63244 317 aaKnown RBP16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TTC31Q49AM3 519 aaPredicted RBP16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 BROXQ5VW32 411 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 KLHDC10Q6PID8 442 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ACOT1Q86TX2 421 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FUKQ8N0W3 1084 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FAM181AQ8N9Y4 354 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SORCS1Q8WY21 1168 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ELF4Q99607 663 aaPredicted RBP16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SMYD3Q9H7B4 428 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 OSER1Q9NX31 292 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PLA2G4CQ9UP65 541 aa16.17■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 A0A1W2PQH9 124 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 BEST1O76090 585 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ACADVLP49748 655 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CAMK2GQ13555 558 aaPredicted RBP16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FNDC3BQ53EP0 1204 aaKnown RBP16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZNF667Q5HYK9 610 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PRAMEF14Q5SWL7 426 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FBXL19Q6PCT2 694 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SCARA5Q6ZMJ2 495 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CCDC65Q8IXS2 484 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 EID2Q8N6I1 236 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZMIZ2Q8NF64 920 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SLC2A14Q8TDB8 520 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 DDI1Q8WTU0 396 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 JAKMIP2Q96AA8 810 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 WBP1Q96G27 269 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PIWIL1Q96J94 861 aaKnown RBP16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 DCLK3Q9C098 648 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SGK2Q9HBY8 427 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CSNK1G1Q9HCP0 422 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 NAGPAQ9UK23 515 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SCML2Q9UQR0 700 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 MAST4O15021 2626 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TMEM131Q92545 1883 aa16.16■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FRMD3A2A2Y4 597 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 B8ZZF3 427 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 VILLO15195 856 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 YKT6O15498 198 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FAM200BP0CF97 657 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 RALAP11233 206 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PSEN1P49768 467 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 UCNP55089 124 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TMPRSS3P57727 454 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 COG7P83436 770 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZBTB16Q05516 673 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 BIRC3Q13489 604 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PSMD6Q15008 389 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZNF699Q32M78 642 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TBC1D25Q3MII6 688 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZNF248Q8NDW4 579 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 NAF1Q96HR8 494 aaKnown RBP16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SLC2A11Q9BYW1 496 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 XYLT2Q9H1B5 865 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FBRSQ9HAH7 460 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CLCA2Q9UQC9 943 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 NCKAP1Q9Y2A7 1128 aa16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 COL5A1P20908 1838 aaPredicted RBP16.15■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZNF462Q96JM2 2506 aa16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 FAM47DPA6NHR8 397 aa16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 HMBSP08397 361 aa16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 GLDCP23378 1020 aa16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 GJB2P29033 226 aa16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 ADORA2BP29275 332 aa16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 CORO1AP31146 461 aaKnown RBP16.14■□□□□ 0.17
NEDD8-MDP1-204ENST00000605847 ARRB1P49407 418 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms