RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 THAP12O43422 761 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 TSPAN3O60637 253 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 ATG13O75143 517 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 ERBB2P04626 1255 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 APODP05090 189 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 GNA15P30679 374 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 USP8P40818 1118 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 MFAP3P55082 362 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 MRPS21P82921 87 aaKnown RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 COG7P83436 770 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 DRAP1Q14919 205 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 GRAMD4Q6IC98 578 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 ANO7Q6IWH7 933 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 RFWD3Q6PCD5 774 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 RSRC2Q7L4I2 434 aaKnown RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 ARHGAP18Q8N392 663 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 CAMKK1Q8N5S9 505 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 OLIG1Q8TAK6 271 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 SORCS1Q8WY21 1168 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 IRGQQ8WZA9 623 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 SLC39A13Q96H72 371 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 LMLNQ96KR4 655 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 PRICKLE1Q96MT3 831 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 DUSP15Q9H1R2 295 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 ABCC13Q9NSE7 274 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 MBD1Q9UIS9 605 aaPredicted RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 LSM7Q9UK45 103 aaKnown RBP11.14□□□□□ -0.63
TUBE1-210ENST00000604967 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 ABCA7Q8IZY2 2146 aa11.14□□□□□ -0.63
TUBE1-210ENST00000604967 CACNA1AO00555 2505 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 MUC22E2RYF6 1773 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 I6L893 689 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 RPP40O75818 363 aaKnown RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 APBB3O95704 486 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 IGLV3-25P01717 112 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 ZNF18P17022 549 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 GABRG2P18507 467 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 TFE3P19532 575 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 SLC8A3P57103 927 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 SPEM2Q0P670 501 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 PPP2R5DQ14738 602 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 STILQ15468 1287 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 MEA1Q16626 185 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 TPD52L1Q16890 204 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 PLK5Q496M5 336 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 PTPN20Q4JDL3 420 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 TRNP1Q6NT89 227 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 ENOSF1Q7L5Y1 443 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 NOP9Q86U38 636 aaKnown RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 TAC4Q86UU9 113 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 CPXM2Q8N436 756 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 ZNF513Q8N8E2 541 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 STK32AQ8WU08 396 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 ACDQ96AP0 544 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 PLD4Q96BZ4 506 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 LSM14BQ9BX40 385 aaKnown RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 VPS16Q9H269 839 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 CACNA2D2Q9NY47 1150 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 WDR35Q9P2L0 1181 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 PCDHGC3Q9UN70 934 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 HBS1LQ9Y450 684 aaKnown RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 RAD54BQ9Y620 910 aa11.13□□□□□ -0.63
TUBE1-210ENST00000604967 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
TUBE1-210ENST00000604967 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.12□□□□□ -0.63
TUBE1-210ENST00000604967 GDF9O60383 454 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 GRAP2O75791 330 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 NCAM1P13591 858 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 UCHL3P15374 230 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 CHRNB2P17787 502 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 HLA-FP30511 346 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 DGKGP49619 791 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 IRAK1P51617 712 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 DGKEP52429 567 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 MAP7D1Q3KQU3 841 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 OLFML1Q6UWY5 402 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 FAM183BPQ6ZVS7 135 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 TADA2BQ86TJ2 420 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 TSTD1Q8NFU3 115 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 SLC20A1Q8WUM9 679 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 ZC3H10Q96K80 434 aaKnown RBP11.12□□□□□ -0.63
TUBE1-210ENST00000604967 GBP4Q96PP9 640 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 GABRG3Q99928 467 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 OLA1Q9NTK5 396 aaKnown RBP11.12□□□□□ -0.63
TUBE1-210ENST00000604967 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 SLC27A6Q9Y2P4 619 aa11.12□□□□□ -0.63
TUBE1-210ENST00000604967 F8VZ95 297 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms