RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GOLGA8SH3BPF8 625 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 TPP1O14773 563 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 PPEF2O14830 753 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KPNA5O15131 536 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 VILLO15195 856 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 IDH3BO43837 385 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 LRRN2O75325 713 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 GMNNO75496 209 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ATP5HO75947 161 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 NDUFA10O95299 355 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 OAS1P00973 400 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 RSPH10BP0C881 870 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 MAPK3P27361 379 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 GRIA2P42262 883 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KPNA1P52294 538 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 MAP3K7CLP57077 242 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 C16orf72Q14CZ0 275 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 DDR2Q16832 855 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 INSCQ1MX18 579 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 RPUSD3Q6P087 351 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KLHDC10Q6PID8 442 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 C4orf50Q6ZRC1 276 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 DENND5BQ6ZUT9 1274 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 UNC13DQ70J99 1090 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SLC51BQ86UW2 128 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ITIH5Q86UX2 942 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 OR8H3Q8N146 312 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 FITM2Q8N6M3 262 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 BANPQ8N9N5 519 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF527Q8NB42 609 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 HCAR2Q8TDS4 363 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SYN2Q92777 582 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ACSF2Q96CM8 615 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 TBATAQ96M53 351 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SAMD11Q96NU1 681 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 COQ7Q99807 217 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 DHRS4Q9BTZ2 278 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SORBS1Q9BX66 1292 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ZCCHC2Q9C0B9 1178 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 DENND2DQ9H6A0 471 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 MAN1C1Q9NR34 630 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SEMA3GQ9NS98 782 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 INTS9Q9NV88 658 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ZNHIT2Q9UHR6 403 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SLC39A10Q9ULF5 831 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SNX12Q9UMY4 172 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 UTP11Q9Y3A2 253 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 REXO2Q9Y3B8 237 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 MSRB2Q9Y3D2 182 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 PDS5AQ29RF7 1337 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 UMODL1Q5DID0 1318 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ADAMTS7Q9UKP4 1686 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 CAMTA1Q9Y6Y1 1673 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 MACROD2A1Z1Q3 448 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SYCE1LA8MT33 242 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 H0YGN5 161 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 YKT6O15498 198 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 DDX3YO15523 660 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 PTCD1O75127 700 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ALDH1A2O94788 518 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 FKBP9O95302 570 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 EDN3P14138 238 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 NAGAP17050 411 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 PSMA5P28066 241 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 GNA15P30679 374 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 PPARGP37231 505 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 IREB2P48200 963 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 CLK3P49761 638 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ERFP50548 548 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SCNN1GP51170 649 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 STAT2P52630 851 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 IST1P53990 364 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SLC12A3P55017 1021 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KRT76Q01546 638 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 MAP3K10Q02779 954 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SSRP1Q08945 709 aaKnown RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SF3B4Q15427 424 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KCNJ8Q15842 424 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF827Q17R98 1081 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 TIGD6Q17RP2 521 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 TMEM67Q5HYA8 995 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 TMEM63BQ5T3F8 832 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ILDR2Q71H61 639 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 BRINP3Q76B58 766 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 CADM3Q8N126 398 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ELMOD1Q8N336 334 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KCTD6Q8NC69 237 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 C3orf58Q8NDZ4 430 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 RIN3Q8TB24 985 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 UBLCP1Q8WVY7 318 aaPredicted RBP4.88□□□□□ -1.63
LINC01109-201ENST00000603837 CASKIN2Q8WXE0 1202 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ATL1Q8WXF7 558 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 KLRG1Q96E93 195 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 HSH2DQ96JZ2 352 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 ANKRD2Q9GZV1 360 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 SAP130Q9H0E3 1048 aa4.88□□□□□ -1.63
LINC01109-201ENST00000603837 GHITMQ9H3K2 345 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms