RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 HEMGNQ9BXL5 484 aa12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 WDR6Q9NNW5 1121 aaKnown RBP12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.41
UBE2E3-214ENST00000602970 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 H0YGN5 161 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 PHF2O75151 1096 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 GLUD1P00367 558 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 CD48P09326 243 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 RARGP13631 454 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 KRT10P13645 584 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 HMGA1P17096 107 aaKnown RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 GBP1P32455 592 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 ARSEP51690 589 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 AIF1P55008 147 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 GPM6BQ13491 265 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 DPYSL3Q14195 570 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 SIX1Q15475 284 aaPredicted RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 ELF2Q15723 593 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 TAF12Q16514 161 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 TAZQ16635 292 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 CA9Q16790 459 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 EFHC2Q5JST6 749 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 KAZNQ674X7 775 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 CCDC70Q6NSX1 233 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 C8orf74Q6P047 294 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 CCDC149Q6ZUS6 474 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 KLHL7Q8IXQ5 586 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 MRPL43Q8N983 215 aaKnown RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 CASP10Q92851 521 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 TRMT2BQ96GJ1 504 aaKnown RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 SERPINB11Q96P15 392 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 KRT12Q99456 494 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 NKX2-4Q9H2Z4 354 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 DHX35Q9H5Z1 703 aaKnown RBP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 MSRAQ9UJ68 235 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 FZD10Q9ULW2 581 aa12.51□□□□□ -0.41
UBE2E3-214ENST00000602970 ZNF487B1APH4 448 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 H3BNC9 293 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 MSI1O43347 362 aaKnown RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 TJP3O95049 919 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 LRG1P02750 347 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 C8AP07357 584 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 SPATA31D3P0C874 917 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 IRS1P35568 1242 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 CXCR3P49682 368 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 SCAPQ12770 1279 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 NAA30Q147X3 362 aaPredicted RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 ARL13BQ3SXY8 428 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 PPP6R3Q5H9R7 873 aaPredicted RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 SPATA31D4Q6ZUB0 917 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 ITIH5Q86UX2 942 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 RFX6Q8HWS3 928 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 KREMEN2Q8NCW0 462 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 FAM71BQ8TC56 605 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 MICAL1Q8TDZ2 1067 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 RNF34Q969K3 372 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 PSMG2Q969U7 264 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 MYRFLQ96LU7 910 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 ZNF512Q96ME7 567 aaPredicted RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 KCTD15Q96SI1 283 aaPredicted RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 ZNF670Q9BS34 389 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 DDX47Q9H0S4 455 aaKnown RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 SLITRK6Q9H5Y7 841 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 TMEM51Q9NW97 253 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 NUDT5Q9UKK9 219 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 EFR3BQ9Y2G0 817 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 ASB3Q9Y575 518 aa12.5□□□□□ -0.41
UBE2E3-214ENST00000602970 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 TLR5O60602 858 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 RHOXF2BP0C7M4 288 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 L1CAMP32004 1257 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 CHRNA3P32297 505 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms