RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	SYNC	Q9H7C4	482 aa		27.95	■■■□□ 2.06
USF2-215	ENST00000602164	C2orf42	Q9NWW7	574 aa		27.95	■■■□□ 2.06
USF2-215	ENST00000602164	IRAK2	O43187	625 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	LAMTOR5	O43504	91 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	TULP3	O75386	442 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	DAB1	O75553	588 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	GRAP2	O75791	330 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	PENK	P01210	267 aa	Predicted RBP	27.94	■■■□□ 2.06
USF2-215	ENST00000602164	TYR	P14679	529 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	CHKA	P35790	457 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	SCNN1A	P37088	669 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	HARS2	P49590	506 aa	Known RBP	27.94	■■■□□ 2.06
USF2-215	ENST00000602164	UBASH3A	P57075	661 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	TBX4	P57082	545 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	ARID5A	Q03989	594 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	FBXO43	Q4G163	708 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	FIGN	Q5HY92	759 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	FYB2	Q5VWT5	728 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	TRIM72	Q6ZMU5	477 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	IRF2BP2	Q7Z5L9	587 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	ERICH1	Q86X53	443 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	DEFB106A	Q8N104	65 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	NAT16	Q8N8M0	369 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	C18orf8	Q96DM3	657 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	PNKP	Q96T60	521 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	WDR35	Q9P2L0	1181 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	FBXO4	Q9UKT5	387 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164	TLR6	Q9Y2C9	796 aa		27.94	■■■□□ 2.06
USF2-215	ENST00000602164		A0A0A0MRY4	1105 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	ANTXRL	A6NF34	631 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	LRRC53	A6NM62	1247 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	NEDD8-MDP1	E9PL57	170 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164		K7EQS6	105 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	CAPN9	O14815	690 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	RNF40	O75150	1001 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	UNG	P13051	313 aa	Predicted RBP	27.93	■■■□□ 2.06
USF2-215	ENST00000602164	TDGF1	P13385	188 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	FER	P16591	822 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	ZNF445	P59923	1031 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	KDSR	Q06136	332 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	C2CD6	Q53TS8	623 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	E4F1	Q66K89	784 aa	Predicted RBP	27.93	■■■□□ 2.06
USF2-215	ENST00000602164	NUGGC	Q68CJ6	796 aa		27.93	■■■□□ 2.06
USF2-215	ENST00000602164	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	27.92	■■■□□ 2.06
USF2-215	ENST00000602164	TRIM24	O15164	1050 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	KAT7	O95251	611 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	TRUB2	O95900	331 aa	Known RBP	27.92	■■■□□ 2.06
USF2-215	ENST00000602164	SP9	P0CG40	484 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	MMP8	P22894	467 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	SATB1	Q01826	763 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	DCAF6	Q58WW2	860 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	EDEM3	Q9BZQ6	932 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	IRF2BPL	Q9H1B7	796 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	ARHGEF4	Q9NR80	690 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	IFNK	Q9P0W0	207 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	FBXO10	Q9UK96	956 aa		27.92	■■■□□ 2.06
USF2-215	ENST00000602164	CHURC1-FNTB	B4DL54	471 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	PAPSS2	O95340	614 aa	Predicted RBP	27.91	■■■□□ 2.06
USF2-215	ENST00000602164	CENPC	Q03188	943 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	PTP4A2	Q12974	167 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	CLEC16A	Q2KHT3	1053 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	OTUD1	Q5VV17	481 aa	Predicted RBP	27.91	■■■□□ 2.06
USF2-215	ENST00000602164	UNC45B	Q8IWX7	931 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	AZIN2	Q96A70	460 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	AGPAT1	Q99943	283 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	FAM86C1	Q9NVL1	165 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	PLK2	Q9NYY3	685 aa		27.91	■■■□□ 2.06
USF2-215	ENST00000602164	GRIA2	P42262	883 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	CCR3	P51677	355 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	ZNF528	Q3MIS6	628 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	FAM133B	Q5BKY9	247 aa	Known RBP	27.9	■■■□□ 2.06
USF2-215	ENST00000602164	ADGRF1	Q5T601	910 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	NADSYN1	Q6IA69	706 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	MMS22L	Q6ZRQ5	1243 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	MSANTD4	Q8NCY6	345 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	SLC30A5	Q8TAD4	765 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	NELL1	Q92832	810 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	BHMT	Q93088	406 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	ADAM33	Q9BZ11	813 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	DNAJC17	Q9NVM6	304 aa	Known RBP	27.9	■■■□□ 2.06
USF2-215	ENST00000602164	AIPL1	Q9NZN9	384 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	DEC1	Q9P2X7	70 aa		27.9	■■■□□ 2.06
USF2-215	ENST00000602164	ACSL4	O60488	711 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	APOD	P05090	189 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	CISD3	P0C7P0	127 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	CDK17	Q00537	523 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	FAM102A	Q5T9C2	384 aa	Predicted RBP	27.89	■■■□□ 2.06
USF2-215	ENST00000602164	TSSK4	Q6SA08	328 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	TERB1	Q8NA31	727 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	USP33	Q8TEY7	942 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	XPO6	Q96QU8	1125 aa	Known RBP	27.89	■■■□□ 2.06
USF2-215	ENST00000602164	CALCOCO1	Q9P1Z2	691 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164	TMEM59L	Q9UK28	342 aa		27.89	■■■□□ 2.06
USF2-215	ENST00000602164		K7ESF4	209 aa		27.88	■■■□□ 2.05
USF2-215	ENST00000602164	CCDC172	P0C7W6	258 aa		27.88	■■■□□ 2.05
USF2-215	ENST00000602164	SLC6A4	P31645	630 aa		27.88	■■■□□ 2.05
USF2-215	ENST00000602164	NOS2	P35228	1153 aa		27.88	■■■□□ 2.05
USF2-215	ENST00000602164	MATK	P42679	507 aa		27.88	■■■□□ 2.05
USF2-215	ENST00000602164	CXCL12	P48061	93 aa		27.88	■■■□□ 2.05
USF2-215	ENST00000602164	CSTF1	Q05048	431 aa	Known RBP	27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms