RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 GSTA4O15217 222 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 CCDC22O60826 627 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 CCND1P24385 295 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 CHKAP35790 457 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 CACUL1Q86Y37 369 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 TCF25Q9BQ70 676 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 HEY2Q9UBP5 337 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ARF4P18085 180 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 TBX4P57082 545 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 STARD3Q14849 445 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 FNDC3BQ53EP0 1204 aaKnown RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 GDF6Q6KF10 455 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 TMEM154Q6P9G4 183 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 C16orf59Q7L2K0 433 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 VPS39Q96JC1 886 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 PAFAH2Q99487 392 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 GPR63Q9BZJ6 419 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 C3orf70A6NLC5 250 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 B2RBV5 119 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 GNGT2O14610 69 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 SETSIPP0DME0 302 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 SKOR1P84550 965 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 SLFN11Q7Z7L1 901 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 MAF1Q9H063 256 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 XIRP1Q702N8 1843 aaKnown RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 SLX4Q8IY92 1834 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 UBTFL6P0CB48 400 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 PYGBP11216 843 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 KRT80Q6KB66 452 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 RIBC1Q8N443 379 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 DNPEPQ9ULA0 475 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 FAF1Q9UNN5 650 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 DDX60Q8IY21 1712 aaKnown RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ABCA3Q99758 1704 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 BGNP21810 368 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 SOX11P35716 441 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 THEMIS2Q5TEJ8 643 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ZNF662Q6ZS27 426 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ERVK-5Q9HDB9 667 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 PAK5Q9P286 719 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 TRIM33Q9UPN9 1127 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 LZTS3O60299 673 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 RPL9P32969 192 aaKnown RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ZNF618Q5T7W0 954 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 RAB42Q8N4Z0 105 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-207ENST00000601372 VAV3Q9UKW4 847 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
ZNF558-207ENST00000601372 ANP32DO95626 131 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 TCN1P20061 433 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 OXCT1P55809 520 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 GPR152Q8TDT2 470 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 FAM172AQ8WUF8 416 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 PRCCQ92733 491 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 ELMO2Q96JJ3 720 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 YIPF2Q9BWQ6 316 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 SCAMP3O14828 347 aaKnown RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 PTPN1P18031 435 aaKnown RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 HGSNATQ68CP4 663 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 TMEM161BQ8NDZ6 487 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 IPMKQ8NFU5 416 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 C20orf96Q9NUD7 363 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 MID2Q9UJV3 735 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 NUDT5Q9UKK9 219 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 CBX4O00257 560 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 PABPC1LQ4VXU2 614 aaKnown RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 E2F7Q96AV8 911 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 NSL1Q96IY1 281 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 DNM1LO00429 736 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 PCDH8O95206 1070 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 SNRPAP09012 282 aaKnown RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 GLUD2P49448 558 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 FBXO46Q6PJ61 603 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 NPAS4Q8IUM7 802 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 LRRN4Q8WUT4 740 aa11.4□□□□□ -0.58
ZNF558-207ENST00000601372 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 MRPL46Q9H2W6 279 aaKnown RBP11.4□□□□□ -0.58
ZNF558-207ENST00000601372 BRCC3P46736 316 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 BMPR2Q13873 1038 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 CCNG2Q16589 344 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 NLRP9Q7RTR0 991 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 LCA5Q86VQ0 697 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 EXD1Q8NHP7 514 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 EGFL8Q99944 293 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 TTPALQ9BTX7 342 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 CEP41Q9BYV8 373 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 BFARQ9NZS9 450 aa11.4□□□□□ -0.59
ZNF558-207ENST00000601372 MTO1Q9Y2Z2 717 aaKnown RBP11.4□□□□□ -0.59
ZNF558-207ENST00000601372 TGFB1I1O43294 461 aa11.39□□□□□ -0.59
ZNF558-207ENST00000601372 PIAS1O75925 651 aa11.39□□□□□ -0.59
ZNF558-207ENST00000601372 RBBP7Q16576 425 aa11.39□□□□□ -0.59
ZNF558-207ENST00000601372 SDHAF4Q5VUM1 108 aa11.39□□□□□ -0.59
ZNF558-207ENST00000601372 APTXQ7Z2E3 356 aaKnown RBP11.39□□□□□ -0.59
ZNF558-207ENST00000601372 C3orf20Q8ND61 904 aa11.39□□□□□ -0.59
ZNF558-207ENST00000601372 ICA1LQ8NDH6 482 aa11.39□□□□□ -0.59
ZNF558-207ENST00000601372 ADAM32Q8TC27 787 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms