RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ATP5C1P36542 298 aaKnown RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 KPNA1P52294 538 aaPredicted RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 KLHDC10Q6PID8 442 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 RBM23Q86U06 439 aaKnown RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 GCNAQ96QF7 691 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 TLE6Q9H808 572 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 ZNF334Q9HCZ1 680 aaPredicted RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.44■■□□□ 1.343e-8■□□□□ 10.2
IRF3-228ENST00000601291 ARHGEF38Q9NXL2 777 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 DNMT3LQ9UJW3 386 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 SPDYE4A6NLX3 237 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 PER2O15055 1255 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 CCL16O15467 120 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 HNRNPA1P09651 372 aaKnown RBP eCLIP23.43■■□□□ 1.34
IRF3-228ENST00000601291 ARL4AP40617 200 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 TBX4P57082 545 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 KLF1Q13351 362 aaPredicted RBP23.43■■□□□ 1.34
IRF3-228ENST00000601291 TRIP4Q15650 581 aaPredicted RBP23.43■■□□□ 1.34
IRF3-228ENST00000601291 TEX35Q5T0J7 233 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 ANKS1BQ7Z6G8 1248 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 MIB1Q86YT6 1006 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 RFX6Q8HWS3 928 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 UBXN4Q92575 508 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 PPP2R3CQ969Q6 453 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 KCTD15Q96SI1 283 aaPredicted RBP23.43■■□□□ 1.34
IRF3-228ENST00000601291 ASAH2Q9NR71 780 aa23.43■■□□□ 1.34
IRF3-228ENST00000601291 RCOR3Q9P2K3 495 aaPredicted RBP23.43■■□□□ 1.34
IRF3-228ENST00000601291 EPOPA6NHQ4 379 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 TBX18O95935 607 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 APOEP02649 317 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 TFDP2Q14188 446 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 CCDC70Q6NSX1 233 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 ADGRD2Q7Z7M1 963 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 MMGT1Q8N4V1 131 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.42■■□□□ 1.34
IRF3-228ENST00000601291 HCFC2Q9Y5Z7 792 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 CEP290O15078 2479 aa23.42■■□□□ 1.34
IRF3-228ENST00000601291 TCRBV7S2A1N4TA0A589 114 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 SLC12A8A0AV02 714 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 XYLBO75191 536 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 FGF19O95750 216 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 F11P03951 625 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 GABRR2P28476 465 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 CDC25CP30307 473 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 ZNF135P52742 658 aaPredicted RBP23.41■■□□□ 1.34
IRF3-228ENST00000601291 TERF1P54274 439 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 DUSP6Q16828 381 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 TMC8Q8IU68 726 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 NOA1Q8NC60 698 aaKnown RBP23.41■■□□□ 1.34
IRF3-228ENST00000601291 MRPL38Q96DV4 380 aaKnown RBP23.41■■□□□ 1.34
IRF3-228ENST00000601291 SLC39A13Q96H72 371 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 CDCA3Q99618 268 aaPredicted RBP23.41■■□□□ 1.34
IRF3-228ENST00000601291 CORO1BQ9BR76 489 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 HERPUD2Q9BSE4 406 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 PRO3102Q9H379 93 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 IL21Q9HBE4 155 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 TMPRSS4Q9NRS4 437 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 HOMER3Q9NSC5 361 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 MTMR10Q9NXD2 777 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 ZDHHC7Q9NXF8 308 aa23.41■■□□□ 1.34
IRF3-228ENST00000601291 HBS1LQ9Y450 684 aaKnown RBP23.41■■□□□ 1.34
IRF3-228ENST00000601291 H3BRJ5 948 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 COCHO43405 550 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 MMRN1Q13201 1228 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 MTA1Q13330 715 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 ANKRD20A8PQ5CZ79 823 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 BBS12Q6ZW61 710 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 TMEM150AQ86TG1 271 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 KLHL7Q8IXQ5 586 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 PYROXD2Q8N2H3 581 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 TSC1Q92574 1164 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 MRPS31Q92665 395 aaKnown RBP23.4■■□□□ 1.34
IRF3-228ENST00000601291 FAF2Q96CS3 445 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 FCRL2Q96LA5 508 aaPredicted RBP23.4■■□□□ 1.34
IRF3-228ENST00000601291 RNF157Q96PX1 679 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 HAPLN3Q96S86 360 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 SLC12A6Q9UHW9 1150 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 CST8O60676 142 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 PHF2O75151 1096 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 RFPL2O75678 378 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 OAS1P00973 400 aaKnown RBP23.4■■□□□ 1.34
IRF3-228ENST00000601291 GTF2F1P35269 517 aaKnown RBP eCLIP23.4■■□□□ 1.344e-10■■■■■ 32.8
IRF3-228ENST00000601291 NRIP1P48552 1158 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 RING1Q06587 406 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 SIX1Q15475 284 aaPredicted RBP23.4■■□□□ 1.34
IRF3-228ENST00000601291 PRELID2Q8N945 189 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 TTC13Q8NBP0 860 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 KRT12Q99456 494 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 EPAS1Q99814 870 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 LRRC3Q9BY71 257 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 OSBPL2Q9H1P3 480 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 ANLNQ9NQW6 1124 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 NR2E1Q9Y466 385 aa23.4■■□□□ 1.34
IRF3-228ENST00000601291 MTCL1Q9Y4B5 1905 aaKnown RBP23.39■■□□□ 1.33
IRF3-228ENST00000601291 EEF2KO00418 725 aaKnown RBP23.39■■□□□ 1.33
IRF3-228ENST00000601291 CTIFO43310 598 aaKnown RBP23.39■■□□□ 1.33
IRF3-228ENST00000601291 CREB3O43889 395 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 POU2F2P09086 479 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 MYL4P12829 197 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 PTPN2P17706 415 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms