RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 ZNF606Q8WXB4 792 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 VPS45Q9NRW7 570 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 APEX2Q9UBZ4 518 aa16.34■□□□□ 0.21
IRF3-226ENST00000600453 EML5Q05BV3 1969 aa16.33■□□□□ 0.21
IRF3-226ENST00000600453 ABCA7Q8IZY2 2146 aa16.33■□□□□ 0.21
IRF3-226ENST00000600453 TCRBV21S2A2A0A5A6 115 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 LETM1O95202 739 aaPredicted RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 HOXB2P14652 356 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 SLC9A1P19634 815 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 GNA15P30679 374 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 DPP6P42658 865 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 RPL34P49207 117 aaKnown RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 SLC11A2P49281 568 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 SNX16P57768 344 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 RING1Q06587 406 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 SPDYCQ5MJ68 293 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 ADGRF1Q5T601 910 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 NUGGCQ68CJ6 796 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 MSANTD2Q6P1R3 559 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 BEND5Q7L4P6 421 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 ZNF557Q8N988 423 aaPredicted RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 HMGB4Q8WW32 186 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 BHMTQ93088 406 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 AZIN2Q96A70 460 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 TMA16Q96EY4 203 aaKnown RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 MED15Q96RN5 788 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 DDX50Q9BQ39 737 aaKnown RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 ZSWIM1Q9BR11 485 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 TPSD1Q9BZJ3 242 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 SFMBT1Q9UHJ3 866 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 STOML2Q9UJZ1 356 aa16.33■□□□□ 0.2
IRF3-226ENST00000600453 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.33■□□□□ 0.2
IRF3-226ENST00000600453 FRYLO94915 3013 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 PRRT4C9JH25 899 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 TRIM24O15164 1050 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 THAP12O43422 761 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 ZNF217O75362 1048 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 PON1P27169 355 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 USP8P40818 1118 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 ATXN1P54253 815 aaKnown RBP16.32■□□□□ 0.2
IRF3-226ENST00000600453 PTK2Q05397 1052 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 EIF4HQ15056 248 aaKnown RBP16.32■□□□□ 0.2
IRF3-226ENST00000600453 LPCAT2Q7L5N7 544 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 GABRG3Q99928 467 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 MIS12Q9H081 205 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
IRF3-226ENST00000600453 THADAQ6YHU6 1953 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.31■□□□□ 0.2
IRF3-226ENST00000600453 ANTXRLA6NF34 631 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 CAPN9O14815 690 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 DCLK1O15075 740 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 IRAK2O43187 625 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 CAVIN2O95810 425 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 NCAM1P13591 858 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 MPLP40238 635 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 P2RY2P41231 377 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 TBX4P57082 545 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 BPIFB4P59827 614 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 CREB5Q02930 508 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 ARID5AQ03989 594 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 STARD3Q14849 445 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 ARHGAP44Q17R89 818 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 AASDHQ4L235 1098 aaPredicted RBP16.31■□□□□ 0.2
IRF3-226ENST00000600453 VWA3BQ502W6 1294 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 PLA2G2CQ5R387 149 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 MPP7Q5T2T1 576 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 EGFLAMQ63HQ2 1017 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 PMS2CLQ68D20 193 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 SLC36A4Q6YBV0 504 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 ANKS1BQ7Z6G8 1248 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 TMEM110Q86TL2 294 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 DDX1Q92499 740 aaKnown RBP16.31■□□□□ 0.2
IRF3-226ENST00000600453 SERPINB11Q96P15 392 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 NOX5Q96PH1 765 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 SLC4A5Q9BY07 1137 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 LMBRD1Q9NUN5 540 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 INVSQ9Y283 1065 aa16.31■□□□□ 0.2
IRF3-226ENST00000600453 BCLAF3A2AJT9 711 aaKnown RBP16.3■□□□□ 0.2
IRF3-226ENST00000600453 PIK3R2O00459 728 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 SLC30A4O14863 429 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 GABBR2O75899 941 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 LIMK1P53667 647 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 NNTQ13423 1086 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
IRF3-226ENST00000600453 SHC3Q92529 594 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 FAM149B1Q96BN6 582 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 PIWIL1Q96J94 861 aaKnown RBP16.3■□□□□ 0.2
IRF3-226ENST00000600453 ZDHHC4Q9NPG8 344 aa16.3■□□□□ 0.2
IRF3-226ENST00000600453 ELOVL2Q9NXB9 296 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms