RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 GJA4P35212 333 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 IFNAR2P48551 515 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 TBX4P57082 545 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 OGDHQ02218 1023 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 FZD5Q13467 585 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 MAMLD1Q13495 774 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 DHCR24Q15392 516 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 MLF2Q15773 248 aaPredicted RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 ITPRIPL2Q3MIP1 535 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 SLC25A52Q3SY17 297 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 CCDC14Q49A88 953 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 SH3PXD2AQ5TCZ1 1133 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 NAIF1Q69YI7 327 aaPredicted RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 PPP1R2P3Q6NXS1 205 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 CC2D1AQ6P1N0 951 aaPredicted RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 ALKBH5Q6P6C2 394 aaKnown RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 TMEM25Q86YD3 366 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 DENND1CQ8IV53 801 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 CENPIQ92674 756 aaPredicted RBP14.31□□□□□ -0.12
VRK3-219ENST00000600137 AZIN2Q96A70 460 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 SERPINB11Q96P15 392 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 TBCBQ99426 244 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 DCLK3Q9C098 648 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 ANLNQ9NQW6 1124 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 ARHGEF3Q9NR81 526 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 PIGVQ9NUD9 493 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 ZDBF2Q9HCK1 2354 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 TMEM221A6NGB7 291 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 M0R296 226 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 SLC9A3R1O14745 358 aaPredicted RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 TPM1P09493 284 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 KRT3P12035 628 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 GLULP15104 373 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 CD72P21854 359 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 CXCR3P49682 368 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 KPNA1P52294 538 aaPredicted RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 ATXN1P54253 815 aaKnown RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 PRKCQQ04759 706 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 FAM133BQ5BKY9 247 aaKnown RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 LY6G5CQ5SRR4 150 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 CCDC122Q5T0U0 273 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 NADSYN1Q6IA69 706 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 SIX5Q8N196 739 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 ATP2A3Q93084 1043 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 MYEOVQ96EZ4 313 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 CFAP57Q96MR6 1250 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.3□□□□□ -0.12
VRK3-219ENST00000600137 TRIM7Q9C029 511 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 GRPEL1Q9HAV7 217 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 FBRSL1Q9HCM7 1045 aaKnown RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 SPHK2Q9NRA0 654 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 RRN3Q9NYV6 651 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 XPO7Q9UIA9 1087 aaKnown RBP14.3□□□□□ -0.12
VRK3-219ENST00000600137 PIAS3Q9Y6X2 628 aa14.3□□□□□ -0.12
VRK3-219ENST00000600137 GOLGA6L7A0A1B0GV03 622 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 TMEM191CA6NGB0 347 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 SPECC1L-ADORA2AF8WAN1 911 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 M0QYT0 321 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 ACSL4O60488 711 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 GPR37L1O60883 481 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 NFATC1O95644 943 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 LATS1O95835 1130 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 CTHP32929 405 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 OPRD1P41143 372 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 PTPN9P43378 593 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 GALCP54803 685 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 MESP2Q0VG99 397 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 C15orf59Q2T9L4 293 aaPredicted RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 RNF43Q68DV7 783 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 CWF19L1Q69YN2 538 aaKnown RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 TMEM139Q8IV31 216 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 UNC45BQ8IWX7 931 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 CPXM2Q8N436 756 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 CSGALNACT1Q8TDX6 532 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 ARHGEF26Q96DR7 871 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 PACSIN1Q9BY11 444 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 C8orf33Q9H7E9 229 aaPredicted RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
VRK3-219ENST00000600137 ZNHIT6Q9NWK9 470 aaKnown RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 DDIT4Q9NX09 232 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 MARK1Q9P0L2 795 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 CNOT8Q9UFF9 292 aaKnown RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 LSM7Q9UK45 103 aaKnown RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 FBXL21Q9UKT6 434 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 ZNF510Q9Y2H8 683 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 MTF2Q9Y483 593 aaPredicted RBP14.29□□□□□ -0.12
VRK3-219ENST00000600137 MIA3Q5JRA6 1907 aa14.29□□□□□ -0.12
VRK3-219ENST00000600137 HOXC11O43248 304 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms