RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 FHOD1Q9Y613 1164 aa23.57■■□□□ 1.36
CCDC9-204ENST00000599398 SPTBN4Q9H254 2564 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 RALGAPA1Q6GYQ0 2036 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 CAPN9O14815 690 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 PENKP01210 267 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-204ENST00000599398 CHRM1P11229 460 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-204ENST00000599398 KRT9P35527 623 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 DRAP1Q14919 205 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-204ENST00000599398 KRT31Q15323 416 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 KLHDC7AQ5VTJ3 777 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 TMEM92Q6UXU6 159 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 TRMT11Q7Z4G4 463 aaKnown RBP23.56■■□□□ 1.36
CCDC9-204ENST00000599398 SLC47A2Q86VL8 602 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 KCNV2Q8TDN2 545 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 P2RY11Q96G91 374 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 TPSD1Q9BZJ3 242 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 POLMQ9NP87 494 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-204ENST00000599398 NAALADL1Q9UQQ1 740 aa23.56■■□□□ 1.36
CCDC9-204ENST00000599398 PRRT4C9JH25 899 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 PAPSS1O43252 624 aaPredicted RBP23.55■■□□□ 1.36
CCDC9-204ENST00000599398 TSPAN3O60637 253 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 ALDH1A2O94788 518 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 CISD3P0C7P0 127 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 CLCN1P35523 988 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 TBX4P57082 545 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 BPIFB4P59827 614 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 SMYD5Q6GMV2 418 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 DPY19L2P1Q6NXN4 242 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 CACNA2D4Q7Z3S7 1137 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 TMEM110Q86TL2 294 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 FAM217AQ8IXS0 508 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 FAM71AQ8IYT1 594 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 FAM160A2Q8N612 972 aaPredicted RBP23.55■■□□□ 1.36
CCDC9-204ENST00000599398 NOX5Q96PH1 765 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 TRIM62Q9BVG3 475 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 PCDHGC3Q9UN70 934 aa23.55■■□□□ 1.36
CCDC9-204ENST00000599398 ADAM23O75077 832 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 FYNP06241 537 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 HNRNPLP14866 589 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCDC9-204ENST00000599398 UCHL3P15374 230 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 WASP42768 502 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 MYL5Q02045 173 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 MPPE1Q53F39 396 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 FKBP15Q5T1M5 1219 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 EGFLAMQ63HQ2 1017 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 NUGGCQ68CJ6 796 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 UNC45BQ8IWX7 931 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 C1orf131Q8NDD1 294 aaKnown RBP23.54■■□□□ 1.36
CCDC9-204ENST00000599398 ANKRD20A12PQ8NF67 263 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 DQX1Q8TE96 717 aaKnown RBP23.54■■□□□ 1.36
CCDC9-204ENST00000599398 PPP1R13BQ96KQ4 1090 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 SERPINB11Q96P15 392 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 PDCL3Q9H2J4 239 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 BCCIPQ9P287 314 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCDC9-204ENST00000599398 TJP2Q9UDY2 1190 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 FBXO10Q9UK96 956 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 STARD13Q9Y3M8 1113 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 CEP83Q9Y592 693 aa23.54■■□□□ 1.36
CCDC9-204ENST00000599398 LATS1O95835 1130 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 RETP07949 1114 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 SLC11A2P49281 568 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 ADGRF1Q5T601 910 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 SDE2Q6IQ49 451 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 KBTBD6Q86V97 674 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 CHPFQ8IZ52 775 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 WDTC1Q8N5D0 677 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 MDGA1Q8NFP4 955 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 ADAM32Q8TC27 787 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 CPXM1Q96SM3 734 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 LHX5Q9H2C1 402 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 POPDC2Q9HBU9 364 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 PLCB1Q9NQ66 1216 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 TMEM63CQ9P1W3 806 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 HCN2Q9UL51 889 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 USP18Q9UMW8 372 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 INVSQ9Y283 1065 aa23.53■■□□□ 1.36
CCDC9-204ENST00000599398 TCRBV21S2A2A0A5A6 115 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 IGLV3-27P01718 113 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 HOXB2P14652 356 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 NTSR1P30989 418 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 ZNF445P59923 1031 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 YWHAZP63104 245 aaKnown RBP23.52■■□□□ 1.36
CCDC9-204ENST00000599398 TYRO3Q06418 890 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 RING1Q06587 406 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 SPEM2Q0P670 501 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 USP39Q53GS9 565 aaKnown RBP23.52■■□□□ 1.36
CCDC9-204ENST00000599398 SYPL2Q5VXT5 272 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 RASSF3Q86WH2 238 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 PGBD3Q8N328 593 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 GPR161Q8N6U8 529 aaKnown RBP23.52■■□□□ 1.36
CCDC9-204ENST00000599398 HMGB4Q8WW32 186 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 TMA16Q96EY4 203 aaKnown RBP23.52■■□□□ 1.36
CCDC9-204ENST00000599398 SYNCQ9H7C4 482 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 STOML2Q9UJZ1 356 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 SLC27A6Q9Y2P4 619 aa23.52■■□□□ 1.36
CCDC9-204ENST00000599398 DCLK1O15075 740 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 CDK11BP21127 795 aaKnown RBP23.51■■□□□ 1.35
CCDC9-204ENST00000599398 GBP1P32455 592 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 GEN1Q17RS7 908 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 BEND5Q7L4P6 421 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms