RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZNF423Q2M1K9 1284 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 KRT39Q6A163 491 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 TMPRSS6Q8IU80 811 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 DENND1CQ8IV53 801 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 ARHGAP18Q8N392 663 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 DDI1Q8WTU0 396 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 SIPA1Q96FS4 1042 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 CAMK1GQ96NX5 476 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 GPR174Q9BXC1 333 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 TMEM8AQ9HCN3 771 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 ITM2CQ9NQX7 267 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 WSB2Q9NYS7 404 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 THAP10Q9P2Z0 257 aaPredicted RBP11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 STRIP2Q9ULQ0 834 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 SLC27A6Q9Y2P4 619 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 KNTC1P50748 2209 aa11.08□□□□□ -0.64
CHMP2A-202ENST00000596708 CFAP47Q6ZTR5 3102 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 IGF2RP11717 2491 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 A0A1B0GTW7 788 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 NPC1O15118 1278 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 RHOBTB3O94955 611 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 NCAM1P13591 858 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 OXTRP30559 389 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 ZNF132P52740 706 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 SLC8A3P57103 927 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 GRIK2Q13002 908 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 ZNF234Q14588 700 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 E2F5Q15329 346 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 NFIL3Q16649 462 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 DCAF12L1Q5VU92 463 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 ANKS1BQ7Z6G8 1248 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 METTL3Q86U44 580 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 PIGZQ86VD9 579 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 ZCCHC9Q8N567 271 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 PRCCQ92733 491 aaPredicted RBP11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 P2RY11Q96G91 374 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 CIPCQ9C0C6 399 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 ELOVL2Q9NXB9 296 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 MARCH2Q9P0N8 246 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 AGO1Q9UL18 857 aaKnown RBP11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 DOCK9Q9BZ29 2069 aa11.07□□□□□ -0.64
CHMP2A-202ENST00000596708 KCNJ18B7U540 433 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 GJB3O75712 270 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 EPHX1P07099 455 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 GTF2H1P32780 548 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 TPMTP51580 245 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 KRT85P78386 507 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 CACUL1Q86Y37 369 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 NAXDQ8IW45 347 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 CPXM2Q8N436 756 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 GUF1Q8N442 669 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 TTC39CQ8N584 583 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 PNPLA1Q8N8W4 532 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 SLC4A11Q8NBS3 891 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 FBXL13Q8NEE6 735 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 SETD7Q8WTS6 366 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 DNASE2BQ8WZ79 361 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 SEMA4DQ92854 862 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 TATDN2Q93075 761 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 PIWIL1Q96J94 861 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 UBXN6Q9BZV1 441 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 ZDHHC5Q9C0B5 715 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 CISHQ9NSE2 258 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 RAB20Q9NX57 234 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 CLEC4EQ9ULY5 219 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 ZFHX4Q86UP3 3567 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 SHROOM3Q8TF72 1996 aa11.06□□□□□ -0.64
CHMP2A-202ENST00000596708 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 FAM221BA6H8Z2 402 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 METTL12A8MUP2 240 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 BCAT2O15382 392 aaPredicted RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 TIMM44O43615 452 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 TSPAN3O60637 253 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 PLXNA2O75051 1894 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 FTH1P19P0C7X4 201 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 HLA-EP13747 358 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 MXI1P50539 228 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 TKTL1P51854 596 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 NDUFA8P51970 172 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 RAD23BP54727 409 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ENPEPQ07075 957 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 DPYDQ12882 1025 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ACACAQ13085 2346 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ENPP2Q13822 863 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 EIF4HQ15056 248 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 MPPE1Q53F39 396 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 RAB41Q5JT25 222 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ARHGAP17Q68EM7 881 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 SERPINA13PQ6UXR4 307 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 FAM124AQ86V42 546 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ANKRD52Q8NB46 1076 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms