RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 KAT7O95251 611 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 LSM8O95777 96 aaKnown RBP11.62□□□□□ -0.55
VRK3-210ENST00000596121 CAVIN2O95810 425 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 SERPINC1P01008 464 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 PENKP01210 267 aaPredicted RBP11.62□□□□□ -0.55
VRK3-210ENST00000596121 TYRP14679 529 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 TFE3P19532 575 aaPredicted RBP11.62□□□□□ -0.55
VRK3-210ENST00000596121 SLC6A4P31645 630 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 SGSHP51688 502 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 TBX4P57082 545 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 AMPD2Q01433 879 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 SLC6A3Q01959 620 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 KDSRQ06136 332 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 DMWDQ09019 674 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 PTP4A2Q12974 167 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 FILIP1LQ4L180 1135 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 FAM133BQ5BKY9 247 aaKnown RBP11.62□□□□□ -0.55
VRK3-210ENST00000596121 FYB2Q5VWT5 728 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 TRNP1Q6NT89 227 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 PHLDB2Q86SQ0 1253 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 ERICH1Q86X53 443 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 XYLT1Q86Y38 959 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 SYNPOQ8N3V7 929 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 SPEM1Q8N4L4 309 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 SLC30A5Q8TAD4 765 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 NELL1Q92832 810 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 ATOH1Q92858 354 aaPredicted RBP11.62□□□□□ -0.55
VRK3-210ENST00000596121 BBS2Q9BXC9 721 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 DCLK3Q9C098 648 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 POPDC2Q9HBU9 364 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 ZDHHC4Q9NPG8 344 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 ASNSD1Q9NWL6 643 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 FBXO10Q9UK96 956 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 ZNF510Q9Y2H8 683 aa11.62□□□□□ -0.55
VRK3-210ENST00000596121 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 LRRC53A6NM62 1247 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 PRRT4C9JH25 899 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 LAMTOR5O43504 91 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 CACNG3O60359 315 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 GJB6O95452 261 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 TRUB2O95900 331 aaKnown RBP11.61□□□□□ -0.55
VRK3-210ENST00000596121 GLI1P08151 1106 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 UNGP13051 313 aaPredicted RBP11.61□□□□□ -0.55
VRK3-210ENST00000596121 SEC13P55735 322 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 RING1Q06587 406 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 DCAF6Q58WW2 860 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
VRK3-210ENST00000596121 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 RFWD3Q6PCD5 774 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 MMS22LQ6ZRQ5 1243 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 SLC26A9Q7LBE3 791 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 ZNF677Q86XU0 584 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 CPXM2Q8N436 756 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 ZNF397Q8NF99 534 aaPredicted RBP11.61□□□□□ -0.55
VRK3-210ENST00000596121 USP33Q8TEY7 942 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 GOLGA1Q92805 767 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 C18orf8Q96DM3 657 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 NOX5Q96PH1 765 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 AGPAT1Q99943 283 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 TSPY26PQ9H489 355 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 ARHGEF4Q9NR80 690 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 WDR35Q9P2L0 1181 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 FBXO4Q9UKT5 387 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 TLR6Q9Y2C9 796 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 R4GN57 208 aa11.61□□□□□ -0.55
VRK3-210ENST00000596121 ZFHX2Q9C0A1 2572 aaPredicted RBP11.61□□□□□ -0.55
VRK3-210ENST00000596121 CHURC1-FNTBB4DL54 471 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 GOLGA8SH3BPF8 625 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 I6L893 689 aaPredicted RBP11.6□□□□□ -0.55
VRK3-210ENST00000596121 CAPN9O14815 690 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 IRAK2O43187 625 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 ACSL4O60488 711 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 HSF2BPO75031 334 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 DAB1O75553 588 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 HNRNPLP14866 589 aaKnown RBP eCLIP11.6□□□□□ -0.55
VRK3-210ENST00000596121 MMP8P22894 467 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 PLA2G5P39877 138 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 EIF2DP41214 584 aaKnown RBP11.6□□□□□ -0.55
VRK3-210ENST00000596121 GRIA2P42262 883 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 KIR2DL1P43626 348 aaPredicted RBP11.6□□□□□ -0.55
VRK3-210ENST00000596121 CXCL12P48061 93 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 HARS2P49590 506 aaKnown RBP11.6□□□□□ -0.55
VRK3-210ENST00000596121 UBASH3AP57075 661 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 RNASE9P60153 205 aaKnown RBP11.6□□□□□ -0.55
VRK3-210ENST00000596121 CLEC16AQ2KHT3 1053 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 RAB6CQ53S08 254 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 C2orf27AQ580R0 203 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 ADGRF1Q5T601 910 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 DNAAF5Q86Y56 855 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 RNF214Q8ND24 703 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 RPLP0P6Q8NHW5 317 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 IPO4Q8TEX9 1081 aaKnown RBP11.6□□□□□ -0.55
VRK3-210ENST00000596121 SERPINB11Q96P15 392 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 RAB6CQ9H0N0 254 aa11.6□□□□□ -0.55
VRK3-210ENST00000596121 SYNCQ9H7C4 482 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms