RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 FBXL21Q9UKT6 434 aa20.12■□□□□ 0.81
PNKP-207ENST00000596014 NENFQ9UMX5 172 aa20.12■□□□□ 0.81
PNKP-207ENST00000596014 COL4A2P08572 1712 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 OTOL1A6NHN0 477 aaPredicted RBP20.11■□□□□ 0.81
PNKP-207ENST00000596014 IRAK2O43187 625 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 CORO1AP31146 461 aaKnown RBP20.11■□□□□ 0.81
PNKP-207ENST00000596014 RFC1P35251 1148 aaPredicted RBP20.11■□□□□ 0.81
PNKP-207ENST00000596014 HARS2P49590 506 aaKnown RBP20.11■□□□□ 0.81
PNKP-207ENST00000596014 RUNX3Q13761 415 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 SLC25A52Q3SY17 297 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 SLC44A4Q53GD3 710 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 DNAJC24Q6P3W2 148 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 DENND1CQ8IV53 801 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 TTC8Q8TAM2 541 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 ATP2A3Q93084 1043 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 OTUB2Q96DC9 234 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 SLC39A13Q96H72 371 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 FCRL2Q96LA5 508 aaPredicted RBP20.11■□□□□ 0.81
PNKP-207ENST00000596014 FAM204AQ9H8W3 233 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 HEBP1Q9NRV9 189 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 DDIT4Q9NX09 232 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 STAP1Q9ULZ2 295 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 ZNF510Q9Y2H8 683 aa20.11■□□□□ 0.81
PNKP-207ENST00000596014 M0QYT0 321 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ATMINO43313 823 aaPredicted RBP20.1■□□□□ 0.81
PNKP-207ENST00000596014 TFE3P19532 575 aaPredicted RBP20.1■□□□□ 0.81
PNKP-207ENST00000596014 GBP1P32455 592 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ITPRIPL2Q3MIP1 535 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 PPP1R15BQ5SWA1 713 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 PLEKHA7Q6IQ23 1121 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 TRIM67Q6ZTA4 783 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 RXFP2Q8WXD0 754 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 TRIM11Q96F44 468 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ADAM33Q9BZ11 813 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ECT2Q9H8V3 914 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 PARVAQ9NVD7 372 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 CNOT8Q9UFF9 292 aaKnown RBP20.1■□□□□ 0.81
PNKP-207ENST00000596014 AGO1Q9UL18 857 aaKnown RBP20.1■□□□□ 0.81
PNKP-207ENST00000596014 CA14Q9ULX7 337 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 SYNJ2BP-COX16A0A087WUM0 186 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 C2CD4BA6NLJ0 364 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 MYBL1P10243 752 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 PDGFRAP16234 1089 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ABCB4P21439 1286 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 RPL7AP62424 266 aaKnown RBP20.1■□□□□ 0.81
PNKP-207ENST00000596014 MAMLD1Q13495 774 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 OTUD1Q5VV17 481 aaPredicted RBP20.1■□□□□ 0.81
PNKP-207ENST00000596014 NUGGCQ68CJ6 796 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 UNC45BQ8IWX7 931 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ZNF653Q96CK0 615 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 CFAP57Q96MR6 1250 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 ARHGEF3Q9NR81 526 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 COX16Q9P0S2 106 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 CALCOCO1Q9P1Z2 691 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 PYCARDQ9ULZ3 195 aa20.1■□□□□ 0.81
PNKP-207ENST00000596014 KRBA1A5PL33 1030 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 NFATC1O95644 943 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 SULT1E1P49888 294 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 NME3Q13232 169 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 ZC3H12AQ5D1E8 599 aaKnown RBP20.09■□□□□ 0.81
PNKP-207ENST00000596014 RHBDF2Q6PJF5 856 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 CPA6Q8N4T0 437 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 PGAP3Q96FM1 320 aaPredicted RBP20.09■□□□□ 0.81
PNKP-207ENST00000596014 MCEEQ96PE7 176 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 TBCBQ99426 244 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 SPTLC3Q9NUV7 552 aa20.09■□□□□ 0.81
PNKP-207ENST00000596014 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.09■□□□□ 0.81
PNKP-207ENST00000596014 FECHP22830 423 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 SDC4P31431 198 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 GALCP54803 685 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 MLLT6P55198 1093 aaPredicted RBP20.08■□□□□ 0.81
PNKP-207ENST00000596014 DHCR24Q15392 516 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 MLF2Q15773 248 aaPredicted RBP20.08■□□□□ 0.81
PNKP-207ENST00000596014 CCDC14Q49A88 953 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 DCUN1D2Q6PH85 259 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 SIX5Q8N196 739 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 THAP2Q9H0W7 228 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 PIGVQ9NUD9 493 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 PIAS3Q9Y6X2 628 aa20.08■□□□□ 0.81
PNKP-207ENST00000596014 ANKRD62A6NC57 917 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 F9P00740 461 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 CYP17A1P05093 508 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 GLULP15104 373 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 SOX9P48436 509 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 NR1H3Q13133 447 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 BNIPLQ7Z465 357 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 AZIN2Q96A70 460 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 C8orf33Q9H7E9 229 aaPredicted RBP20.07■□□□□ 0.8
PNKP-207ENST00000596014 MYO1AQ9UBC5 1043 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 STOML2Q9UJZ1 356 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 COL4A3Q01955 1670 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 DLL1O00548 723 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 ENDOD1O94919 500 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 LATS1O95835 1130 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 GPD1P21695 349 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 CCR1P32246 355 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 GJA4P35212 333 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 CHKAP35790 457 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 PTPN9P43378 593 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms