RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 CILPO75339 1184 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 KIF20AO95235 890 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 HMBSP08397 361 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 CD58P19256 250 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 CORO1AP31146 461 aaKnown RBP19.55■□□□□ 0.72
PDE4C-208ENST00000595343 COG7P83436 770 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 DCAF12L1Q5VU92 463 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 CCNI2Q6ZMN8 369 aaPredicted RBP19.55■□□□□ 0.72
PDE4C-208ENST00000595343 GLRX5Q86SX6 157 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 SIPA1Q96FS4 1042 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 PIWIL1Q96J94 861 aaKnown RBP19.55■□□□□ 0.72
PDE4C-208ENST00000595343 DUSP16Q9BY84 665 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 DCLK3Q9C098 648 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 IL21RQ9HBE5 538 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 PCOLCE2Q9UKZ9 415 aa19.55■□□□□ 0.72
PDE4C-208ENST00000595343 APOBEC2Q9Y235 224 aaKnown RBP19.55■□□□□ 0.72
PDE4C-208ENST00000595343 METTL12A8MUP2 240 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 BCAT2O15382 392 aaPredicted RBP19.54■□□□□ 0.72
PDE4C-208ENST00000595343 SYNCRIPO60506 623 aaKnown RBP19.54■□□□□ 0.72
PDE4C-208ENST00000595343 PDIA4P13667 645 aaKnown RBP19.54■□□□□ 0.72
PDE4C-208ENST00000595343 OXTRP30559 389 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 VAMP7P51809 220 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 EFEMP1Q12805 493 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 ZNF234Q14588 700 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 PPP1R26Q5T8A7 1209 aaPredicted RBP19.54■□□□□ 0.72
PDE4C-208ENST00000595343 ANKS1BQ7Z6G8 1248 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 SLCO6A1Q86UG4 719 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 TAS1R2Q8TE23 839 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 PRCCQ92733 491 aaPredicted RBP19.54■□□□□ 0.72
PDE4C-208ENST00000595343 NIF3L1Q9GZT8 377 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 GAREM1Q9H706 876 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 ELOVL2Q9NXB9 296 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 AGO1Q9UL18 857 aaKnown RBP19.54■□□□□ 0.72
PDE4C-208ENST00000595343 CLEC4EQ9ULY5 219 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 GPSM3Q9Y4H4 160 aa19.54■□□□□ 0.72
PDE4C-208ENST00000595343 LAMA5O15230 3695 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 MAPK13O15264 365 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 IGLV3-19P01714 112 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 ZNF883P0CG24 379 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 TRIM49P0CI25 452 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 TRIM49CP0CI26 452 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 GCLMP48507 274 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 COPAP53621 1224 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 EIF4HQ15056 248 aaKnown RBP19.53■□□□□ 0.72
PDE4C-208ENST00000595343 DENND1CQ8IV53 801 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 RBBP8NLQ8NC74 664 aaPredicted RBP19.53■□□□□ 0.72
PDE4C-208ENST00000595343 SETD7Q8WTS6 366 aaKnown RBP19.53■□□□□ 0.72
PDE4C-208ENST00000595343 NUP58Q9BVL2 599 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 TRAF3IP3Q9Y228 551 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 PLXNB3Q9ULL4 1909 aa19.53■□□□□ 0.72
PDE4C-208ENST00000595343 ACACAQ13085 2346 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 KNL1Q8NG31 2342 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CALUO43852 315 aaPredicted RBP19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CER1O95813 267 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 F13A1P00488 732 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CYBBP04839 570 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 ZSCAN22P10073 491 aaPredicted RBP19.52■□□□□ 0.72
PDE4C-208ENST00000595343 ACADMP11310 421 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 PRKCHP24723 683 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 MATKP42679 507 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 BNC1Q01954 994 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 PPP3CAQ08209 521 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 E2F5Q15329 346 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 ZNF394Q53GI3 561 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 C19orf48Q6RUI8 117 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 IL27RAQ6UWB1 636 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CACUL1Q86Y37 369 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CPXM2Q8N436 756 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 SORCS1Q8WY21 1168 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 HEXIM2Q96MH2 286 aaKnown RBP19.52■□□□□ 0.72
PDE4C-208ENST00000595343 DNAI2Q9GZS0 605 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CCDC86Q9H6F5 360 aaKnown RBP19.52■□□□□ 0.72
PDE4C-208ENST00000595343 TM7SF3Q9NS93 570 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 EIF2B4Q9UI10 523 aaKnown RBP19.52■□□□□ 0.72
PDE4C-208ENST00000595343 FNDC3AQ9Y2H6 1198 aaKnown RBP19.52■□□□□ 0.72
PDE4C-208ENST00000595343 ADAMTS20P59510 1910 aa19.52■□□□□ 0.72
PDE4C-208ENST00000595343 CKAP5Q14008 2032 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 APC2O95996 2303 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 EPHX1P07099 455 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 HLA-BQ31612 363 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 TMEM215Q68D42 235 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 ATL3Q6DD88 541 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 INTS8Q75QN2 995 aaKnown RBP19.51■□□□□ 0.71
PDE4C-208ENST00000595343 ARHGAP18Q8N392 663 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 C1orf216Q8TAB5 229 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 DDI1Q8WTU0 396 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 SLC2A11Q9BYW1 496 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 CIPCQ9C0C6 399 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 MARCH2Q9P0N8 246 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 KIAA1522Q9P206 1035 aaPredicted RBP19.51■□□□□ 0.71
PDE4C-208ENST00000595343 STRIP2Q9ULQ0 834 aa19.51■□□□□ 0.71
PDE4C-208ENST00000595343 SLC12A8A0AV02 714 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 NR2F2P24468 414 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 SERPINA13PQ6UXR4 307 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 RSRC2Q7L4I2 434 aaKnown RBP19.5■□□□□ 0.71
PDE4C-208ENST00000595343 FAM124AQ86V42 546 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 FAM217AQ8IXS0 508 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 BAHD1Q8TBE0 780 aaPredicted RBP19.5■□□□□ 0.71
PDE4C-208ENST00000595343 UBXN6Q9BZV1 441 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 MMRN2Q9H8L6 949 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms