RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 IRF2BP2Q7Z5L9 587 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 XYLT1Q86Y38 959 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 SPEM1Q8N4L4 309 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 NAT16Q8N8M0 369 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 SLC39A13Q96H72 371 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 FCRL2Q96LA5 508 aaPredicted RBP22.83■■□□□ 1.25
HOMER3-206ENST00000594439 PNKPQ96T60 521 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 BBS2Q9BXC9 721 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 EDEM3Q9BZQ6 932 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 IFNKQ9P0W0 207 aa22.83■■□□□ 1.25
HOMER3-206ENST00000594439 LRRC53A6NM62 1247 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.82■■□□□ 1.24
HOMER3-206ENST00000594439 NEDD8-MDP1E9PL57 170 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 K7EQS6 105 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 CACNG3O60359 315 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 RNF40O75150 1001 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 TULP3O75386 442 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 DAB1O75553 588 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 TRUB2O95900 331 aaKnown RBP22.82■■□□□ 1.24
HOMER3-206ENST00000594439 PENKP01210 267 aaPredicted RBP22.82■■□□□ 1.24
HOMER3-206ENST00000594439 TYRP14679 529 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 SCNN1AP37088 669 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 ZNF445P59923 1031 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 EIF4EBP2Q13542 120 aaPredicted RBP22.82■■□□□ 1.24
HOMER3-206ENST00000594439 FBXO43Q4G163 708 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 C2CD6Q53TS8 623 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 DCAF6Q58WW2 860 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 FIGNQ5HY92 759 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 NUGGCQ68CJ6 796 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 PKN3Q6P5Z2 889 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 MSANTD4Q8NCY6 345 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 AGPAT1Q99943 283 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 IRF2BPLQ9H1B7 796 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 PRMT8Q9NR22 394 aaPredicted RBP22.82■■□□□ 1.24
HOMER3-206ENST00000594439 TLR6Q9Y2C9 796 aa22.82■■□□□ 1.24
HOMER3-206ENST00000594439 A0A0A0MRY4 1105 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 GFRA2O00451 464 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 IRAK2O43187 625 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 KAT7O95251 611 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 UNGP13051 313 aaPredicted RBP22.81■■□□□ 1.24
HOMER3-206ENST00000594439 NHLH1Q02575 133 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 KDSRQ06136 332 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 FYB2Q5VWT5 728 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 SFTPA1Q8IWL2 248 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 UNC45BQ8IWX7 931 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 AZIN2Q96A70 460 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 ARHGEF4Q9NR80 690 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 C2orf42Q9NWW7 574 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 FBXO4Q9UKT5 387 aa22.81■■□□□ 1.24
HOMER3-206ENST00000594439 TRIM24O15164 1050 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 APODP05090 189 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 CCDC172P0C7W6 258 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 SP9P0CG40 484 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 MMP8P22894 467 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 CCR3P51677 355 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 CDK17Q00537 523 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 SATB1Q01826 763 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 CLEC16AQ2KHT3 1053 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 ADGRF1Q5T601 910 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 E4F1Q66K89 784 aaPredicted RBP22.8■■□□□ 1.24
HOMER3-206ENST00000594439 MMS22LQ6ZRQ5 1243 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 SLC30A5Q8TAD4 765 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 OLIG1Q8TAK6 271 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 XPO6Q96QU8 1125 aaKnown RBP22.8■■□□□ 1.24
HOMER3-206ENST00000594439 SYT11Q9BT88 431 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 NUP58Q9BVL2 599 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 DNAJC17Q9NVM6 304 aaKnown RBP22.8■■□□□ 1.24
HOMER3-206ENST00000594439 PLK2Q9NYY3 685 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 AIPL1Q9NZN9 384 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 DEC1Q9P2X7 70 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 FBXO10Q9UK96 956 aa22.8■■□□□ 1.24
HOMER3-206ENST00000594439 WDFY4Q6ZS81 3184 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 ANTXRLA6NF34 631 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 CHURC1-FNTBB4DL54 471 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 ACSL4O60488 711 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 CISD3P0C7P0 127 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 CHRM1P11229 460 aaPredicted RBP22.79■■□□□ 1.24
HOMER3-206ENST00000594439 NOS2P35228 1153 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 GRIA2P42262 883 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 CXCL12P48061 93 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 CENPCQ03188 943 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 CSTF1Q05048 431 aaKnown RBP22.79■■□□□ 1.24
HOMER3-206ENST00000594439 PTP4A2Q12974 167 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 ASIC2Q16515 512 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 FAM102AQ5T9C2 384 aaPredicted RBP22.79■■□□□ 1.24
HOMER3-206ENST00000594439 RNF214Q8ND24 703 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 ATOH1Q92858 354 aaPredicted RBP22.79■■□□□ 1.24
HOMER3-206ENST00000594439 BHMTQ93088 406 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 XPO4Q9C0E2 1151 aaKnown RBP22.79■■□□□ 1.24
HOMER3-206ENST00000594439 FAM204AQ9H8W3 233 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 FAM86C1Q9NVL1 165 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 FANCMQ8IYD8 2048 aa22.79■■□□□ 1.24
HOMER3-206ENST00000594439 GOLGA8SH3BPF8 625 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 PAPSS2O95340 614 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-206ENST00000594439 TDGF1P13385 188 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 MATKP42679 507 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 SLC11A2P49281 568 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 ZNF528Q3MIS6 628 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 FAM133BQ5BKY9 247 aaKnown RBP22.78■■□□□ 1.24
HOMER3-206ENST00000594439 ZC3H12AQ5D1E8 599 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms