RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 BYSLQ13895 437 aaKnown RBP11.19□□□□□ -0.62
USE1-203ENST00000593597 PREPLQ4J6C6 727 aaPredicted RBP11.19□□□□□ -0.62
USE1-203ENST00000593597 ARHGAP17Q68EM7 881 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 KIAA1324Q6UXG2 1013 aaKnown RBP11.19□□□□□ -0.62
USE1-203ENST00000593597 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 ZC3H3Q8IXZ2 948 aaKnown RBP11.19□□□□□ -0.62
USE1-203ENST00000593597 UBR7Q8N806 425 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
USE1-203ENST00000593597 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
USE1-203ENST00000593597 THAP10Q9P2Z0 257 aaPredicted RBP11.19□□□□□ -0.62
USE1-203ENST00000593597 ATRXP46100 2492 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 ADAMTS20P59510 1910 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 A0A1W2PQD8 194 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 SRRM3A6NNA2 597 aaPredicted RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 ZNF217O75362 1048 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 KIF20AO95235 890 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 PSMC2P35998 433 aaKnown RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 SGSHP51688 502 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 PMS1P54277 932 aaKnown RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 SIM1P81133 766 aaPredicted RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 GFPT1Q06210 699 aaPredicted RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 GOLGA8FQ08AF8 430 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 GOLGA8DPQ0D2H9 430 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 GRIK2Q13002 908 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 ADAM9Q13443 819 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 ZNF234Q14588 700 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 KRT39Q6A163 491 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 CEP76Q8TAP6 659 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 TOE1Q96GM8 510 aaKnown RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 ULBP1Q9BZM6 244 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 IL21RQ9HBE5 538 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 WSB2Q9NYS7 404 aaPredicted RBP11.18□□□□□ -0.62
USE1-203ENST00000593597 NEUROG3Q9Y4Z2 214 aa11.18□□□□□ -0.62
USE1-203ENST00000593597 CABIN1Q9Y6J0 2220 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 SMG1Q96Q15 3661 aaKnown RBP11.17□□□□□ -0.62
USE1-203ENST00000593597 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 TAF4O00268 1085 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 SH3BP5O60239 455 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 OPHN1O60890 802 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 KRT13P13646 458 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 HOXD9P28356 352 aaPredicted RBP11.17□□□□□ -0.62
USE1-203ENST00000593597 CD6P30203 668 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 GTF2H1P32780 548 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 DPP6P42658 865 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 PSEN1P49768 467 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 MXI1P50539 228 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 YWHAGP61981 247 aaKnown RBP eCLIP11.17□□□□□ -0.62
USE1-203ENST00000593597 PDE4CQ08493 712 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
USE1-203ENST00000593597 GOLGA7BQ2TAP0 167 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 EDRF1Q3B7T1 1238 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 PM20D1Q6GTS8 502 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 RAB44Q7Z6P3 723 aaPredicted RBP11.17□□□□□ -0.62
USE1-203ENST00000593597 METTL3Q86U44 580 aaKnown RBP11.17□□□□□ -0.62
USE1-203ENST00000593597 CACUL1Q86Y37 369 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 DENND1CQ8IV53 801 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 CPXM2Q8N436 756 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 CHCHD4Q8N4Q1 142 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 FBXL13Q8NEE6 735 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 C1orf216Q8TAB5 229 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 WFDC5Q8TCV5 224 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 DNASE2BQ8WZ79 361 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
USE1-203ENST00000593597 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 UBXN6Q9BZV1 441 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 IMPG2Q9BZV3 1241 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 ITM2CQ9NQX7 267 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 RAB20Q9NX57 234 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 MARCH2Q9P0N8 246 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 MSRB2Q9Y3D2 182 aa11.17□□□□□ -0.62
USE1-203ENST00000593597 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 FAM221BA6H8Z2 402 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 MSI1O43347 362 aaKnown RBP11.16□□□□□ -0.62
USE1-203ENST00000593597 CBFA2T3O75081 653 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 ZNF202O95125 648 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 CALCAP01258 141 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 IGLV3-19P01714 112 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 HSP90AA1P07900 732 aaKnown RBP11.16□□□□□ -0.62
USE1-203ENST00000593597 C7P10643 843 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 RALAP11233 206 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 NCAM1P13591 858 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 HLA-EP13747 358 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 HLA-FP30511 346 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 TPMTP51580 245 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 TKTL1P51854 596 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 KRT85P78386 507 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 COG7P83436 770 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 PNOCQ13519 176 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 PLEKHG6Q3KR16 790 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 PKDCCQ504Y2 493 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 SDE2Q6IQ49 451 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 ANKS1BQ7Z6G8 1248 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
USE1-203ENST00000593597 ZNF366Q8N895 744 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 ANKRD52Q8NB46 1076 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 ZCCHC14Q8WYQ9 949 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms