RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 C2CD6Q53TS8 623 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 TRMT10CQ7L0Y3 403 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 HAUS6Q7Z4H7 955 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 ULK2Q8IYT8 1036 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 DAW1Q8N136 415 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 ART4Q93070 314 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 PMEPA1Q969W9 287 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 TMEM117Q9H0C3 514 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 GPBP1L1Q9HC44 474 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC7A8Q9UHI5 535 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 TMEM150BA6NC51 233 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 KPNA4O00629 521 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 ACSL4O60488 711 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 SRGAP2CP0DJJ0 459 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 MUTP22033 750 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 CPA2P48052 419 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 ZBTB16Q05516 673 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 SELENBP1Q13228 472 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 USP41Q3LFD5 358 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 PODNQ7Z5L7 613 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 RMDN1Q96DB5 314 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 GIMAP5Q96F15 307 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 PWWP2AQ96N64 755 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 GPRC5CQ9NQ84 441 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■□□□ 12.7
SMARCA4-217ENST00000591595 HEY2Q9UBP5 337 aa12.62□□□□□ -0.39
SMARCA4-217ENST00000591595 CAPN8A6NHC0 703 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 POLRMTO00411 1230 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CALCAP01258 141 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GZMAP12544 262 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GJA9P57773 515 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GNG2P59768 71 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 PTK2BQ14289 1009 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 PLEKHG4Q58EX7 1191 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 FAM102BQ5T8I3 360 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CYP4F22Q6NT55 531 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 XKR5Q6UX68 686 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 RNF111Q6ZNA4 994 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GSTA5Q7RTV2 222 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 OTOAQ7RTW8 1153 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 DGLUCYQ7Z3D6 616 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GPR141Q7Z602 305 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC9A9Q8IVB4 645 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 PAF1Q8N7H5 531 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ZNF398Q8TD17 642 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 DHX38Q92620 1227 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 PSD2Q9BQI7 771 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 OSBPL8Q9BZF1 889 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CHST7Q9NS84 486 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ANAPC5Q9UJX4 755 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 NOSIPQ9Y314 301 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 PCDHA3Q9Y5H8 950 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ADGRA3Q8IWK6 1321 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ARFGEF1Q9Y6D6 1849 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 B2RBV5 119 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 B8ZZF3 427 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 H3BRJ5 948 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 H3BUI4 141 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 TNPO2O14787 897 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 DNAJA2O60884 412 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ALX3O95076 343 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CYP11B1P15538 503 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ITGA8P53708 1063 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 MRPS9P82933 396 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ITGADQ13349 1161 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 KLHL38Q2WGJ6 581 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ATP2A3Q93084 1043 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 MRRFQ96E11 262 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 HERC2P3Q9BVR0 1158 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CCSER2Q9H7U1 834 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CYLDQ9NQC7 956 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 RWDD3Q9Y3V2 267 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GOLGA8QA0A0J9YX86 632 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ILVBLA1L0T0 632 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GOLGA8OA6NCC3 632 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GOLGA8NF8WBI6 632 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GOLGA8RI6L899 631 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 KLHL41O60662 606 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 TM7SF2O76062 418 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ARHGEF15O94989 841 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 FAM58BPP0C7Q3 252 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ZNF23P17027 643 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CHRNB2P17787 502 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms