RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 RPL7AP62424 266 aaKnown RBP17.32■□□□□ 0.36
GCDH-213ENST00000590627 TAF10Q12962 218 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
GCDH-213ENST00000590627 FAM78AQ5JUQ0 283 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 SNX30Q5VWJ9 437 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 DCUN1D2Q6PH85 259 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 SCD5Q86SK9 330 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 ZBTB44Q8NCP5 570 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 PDZD8Q8NEN9 1154 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 NELL1Q92832 810 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 IRF7Q92985 503 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 FBXO32Q969P5 355 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 RMDN1Q96DB5 314 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 TCEAL4Q96EI5 215 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 ASB16Q96NS5 453 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 MCEEQ96PE7 176 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 SLITRK1Q96PX8 696 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 TRMT61BQ9BVS5 477 aaKnown RBP17.32■□□□□ 0.36
GCDH-213ENST00000590627 LRRC3Q9BY71 257 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 BRD9Q9H8M2 597 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 POPDC2Q9HBU9 364 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 OSGEPQ9NPF4 335 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 METTL5Q9NRN9 209 aaKnown RBP17.32■□□□□ 0.36
GCDH-213ENST00000590627 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 GPR179Q6PRD1 2367 aa17.32■□□□□ 0.36
GCDH-213ENST00000590627 SHISA7A6NL88 538 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 DAB1O75553 588 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 GJB6O95452 261 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 FYNP06241 537 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 NOP2P46087 812 aaKnown RBP17.31■□□□□ 0.36
GCDH-213ENST00000590627 YWHAGP61981 247 aaKnown RBP eCLIP17.31■□□□□ 0.36
GCDH-213ENST00000590627 CSTF1Q05048 431 aaKnown RBP17.31■□□□□ 0.36
GCDH-213ENST00000590627 FZD5Q13467 585 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 TAF12Q16514 161 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 BSPRYQ5W0U4 402 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 ZNF276Q8N554 614 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 TPCN2Q8NHX9 752 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 JOSD2Q8TAC2 188 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 DEPDC1BQ8WUY9 529 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 GOLGA1Q92805 767 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 SMARCD2Q92925 531 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 IER2Q9BTL4 223 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 IL21Q9HBE4 155 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 TLR8Q9NR97 1041 aaKnown RBP17.31■□□□□ 0.36
GCDH-213ENST00000590627 ZSCAN32Q9NX65 697 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 CLIC5Q9NZA1 410 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 GMIPQ9P107 970 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 GREB1Q4ZG55 1949 aa17.31■□□□□ 0.36
GCDH-213ENST00000590627 MACROD2A1Z1Q3 448 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 MYO1FO00160 1098 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 DPYSL4O14531 572 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 PSMC3P17980 439 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 FLT3P36888 993 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 MATKP42679 507 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 ZNF143P52747 638 aaPredicted RBP17.3■□□□□ 0.36
GCDH-213ENST00000590627 IFRD2Q12894 506 aaPredicted RBP17.3■□□□□ 0.36
GCDH-213ENST00000590627 PUM1Q14671 1186 aaKnown RBP eCLIP17.3■□□□□ 0.36
GCDH-213ENST00000590627 TRNP1Q6NT89 227 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 MAMSTRQ6ZN01 415 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 TMC8Q8IU68 726 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 DEFB106AQ8N104 65 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 C17orf53Q8N3J3 647 aaPredicted RBP17.3■□□□□ 0.36
GCDH-213ENST00000590627 NT5C3BQ969T7 300 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 FAM149B1Q96BN6 582 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 FAM126AQ9BYI3 521 aaPredicted RBP17.3■□□□□ 0.36
GCDH-213ENST00000590627 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 NMUR1Q9HB89 426 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 TRPV4Q9HBA0 871 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 PRMT8Q9NR22 394 aaPredicted RBP17.3■□□□□ 0.36
GCDH-213ENST00000590627 ASAH2Q9NR71 780 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.3■□□□□ 0.36
GCDH-213ENST00000590627 IP6K2Q9UHH9 426 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
GCDH-213ENST00000590627 PAXBP1Q9Y5B6 917 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 COL4A2P08572 1712 aa17.3■□□□□ 0.36
GCDH-213ENST00000590627 A0A1W2PQH9 124 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 ZNF840PA6NDX5 716 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 LILRB5O75023 590 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 MOSPD3O75425 235 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 GRAP2O75791 330 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 FGF19O95750 216 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 F11P03951 625 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 PDGFRAP16234 1089 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 GPD1P21695 349 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 NOS2P35228 1153 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 PTPN9P43378 593 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 PGFP49763 221 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 RNASE9P60153 205 aaKnown RBP17.29■□□□□ 0.36
GCDH-213ENST00000590627 OGDHQ02218 1023 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 GRM2Q14416 872 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 ACAP1Q15027 740 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 C11orf63Q6NUN7 778 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 HS6ST3Q8IZP7 471 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 ZNF687Q8N1G0 1237 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 DCLK2Q8N568 766 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
GCDH-213ENST00000590627 EMC1Q8N766 993 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms