RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 TMEM110-MUSTN1A8MSY1 372 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 EIF3CLB5ME19 914 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 CCP110O43303 1012 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 SLC34A2O95436 690 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 TFE3P19532 575 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 RDXP35241 583 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 VCPP55072 806 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 ZC3H12AQ5D1E8 599 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 C10orf76Q5T2E6 689 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 PLEKHA7Q6IQ23 1121 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 TRNP1Q6NT89 227 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 SCYL2Q6P3W7 929 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 UNC45BQ8IWX7 931 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 BBS7Q8IWZ6 715 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 ATP6V0D2Q8N8Y2 350 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 ZNF564Q8TBZ8 553 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 FAM172AQ8WUF8 416 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 OSCP1Q8WVF1 389 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 IRF7Q92985 503 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 ATP2A3Q93084 1043 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 NPY6RQ99463 290 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 EIF3CQ99613 913 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 DESI2Q9BSY9 194 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 DDX23Q9BUQ8 820 aaKnown RBP13.38□□□□□ -0.27
DDX39A-213ENST00000590315 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 CD320Q9NPF0 282 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 TBC1D14Q9P2M4 693 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 SLC12A6Q9UHW9 1150 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 PAXBP1Q9Y5B6 917 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 PCDHA13Q9Y5I0 950 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 DOCK4Q8N1I0 1966 aa13.38□□□□□ -0.27
DDX39A-213ENST00000590315 CHADO15335 359 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 RNF8O76064 485 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 NFATC1O95644 943 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 F9P00740 461 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 CYP1A2P05177 515 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 SLC2A3P11169 496 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 SRFP11831 508 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 ARSAP15289 507 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 TCF3P15923 654 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 FECHP22830 423 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 CCR1P32246 355 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 NOP2P46087 812 aaKnown RBP13.37□□□□□ -0.27
DDX39A-213ENST00000590315 SLC11A2P49281 568 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 ATXN1P54253 815 aaKnown RBP13.37□□□□□ -0.27
DDX39A-213ENST00000590315 TNK2Q07912 1038 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 FCHO2Q0JRZ9 810 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 NNTQ13423 1086 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 PDGFRLQ15198 375 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 ANO4Q32M45 955 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 CCDC14Q49A88 953 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 CHSY1Q86X52 802 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 FAM131BQ86XD5 332 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 TMEM139Q8IV31 216 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 LRRC8AQ8IWT6 810 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 CPA6Q8N4T0 437 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 BHMTQ93088 406 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 ASIC4Q96FT7 647 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 FCRL2Q96LA5 508 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-213ENST00000590315 PIGVQ9NUD9 493 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 CA14Q9ULX7 337 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 DUSP12Q9UNI6 340 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 ZNF510Q9Y2H8 683 aa13.37□□□□□ -0.27
DDX39A-213ENST00000590315 TCRBV5S1A1TA0A578 114 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TYW5A2RUC4 315 aaKnown RBP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TRDMT1O14717 391 aaKnown RBP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TSPAN3O60637 253 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 GJC1P36383 396 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 PTPN9P43378 593 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 NAP1L1P55209 391 aaKnown RBP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 KRT83P78385 493 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 PFKPQ01813 784 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 RING1Q06587 406 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 NR1H3Q13133 447 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 PPP1R15BQ5SWA1 713 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 OTUD1Q5VV17 481 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TPGS1Q6ZTW0 290 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 HTR3DQ70Z44 454 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 ARCQ7LC44 396 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 RHOT2Q8IXI1 618 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 DDX50Q9BQ39 737 aaKnown RBP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 CNPY3Q9BT09 278 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 TKTL2Q9H0I9 626 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 SIK2Q9H0K1 926 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 LINC00597Q9H2U6 94 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 WDCPQ9H6R7 721 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDX39A-213ENST00000590315 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
DDX39A-213ENST00000590315 AGO1Q9UL18 857 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms