RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TAC4Q86UU9 113 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 CPXM2Q8N436 756 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 TERB1Q8NA31 727 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 IL17RCQ8NAC3 791 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 ADAM32Q8TC27 787 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 NKD2Q969F2 451 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-212ENST00000590260 MYEOVQ96EZ4 313 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 ADAM33Q9BZ11 813 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 DNAJC17Q9NVM6 304 aaKnown RBP19.01■□□□□ 0.63
DDX39A-212ENST00000590260 ZNF510Q9Y2H8 683 aa19.01■□□□□ 0.63
DDX39A-212ENST00000590260 GOLGA6L7A0A1B0GV03 622 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 HRO43593 1189 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 ADAM23O75077 832 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 GFPT2O94808 682 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 APODP05090 189 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 MMEP08473 750 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 SLC6A4P31645 630 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 ZNF165P49910 485 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 UBXN1Q04323 297 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 DMC1Q14565 340 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 FAM133BQ5BKY9 247 aaKnown RBP19■□□□□ 0.63
DDX39A-212ENST00000590260 TMEM92Q6UXU6 159 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 CCDC33Q8N5R6 958 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 ALLCQ8N6M5 410 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 EXOC4Q96A65 974 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 FAM149B1Q96BN6 582 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 SLC2A13Q96QE2 648 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 HHIPQ96QV1 700 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 FAM126AQ9BYI3 521 aaPredicted RBP19■□□□□ 0.63
DDX39A-212ENST00000590260 WDR35Q9P2L0 1181 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 DEC1Q9P2X7 70 aa19■□□□□ 0.63
DDX39A-212ENST00000590260 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 SGK1O00141 431 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 ATG13O75143 517 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 CDK11BP21127 795 aaKnown RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 KRT9P35527 623 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 TIE1P35590 1138 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 CHKAP35790 457 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 TNFRSF4P43489 277 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 BPIFB4P59827 614 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 YWHAZP63104 245 aaKnown RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 RING1Q06587 406 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 OTUD1Q5VV17 481 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 OLIG1Q8TAK6 271 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 NAP1L5Q96NT1 182 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 POPDC2Q9HBU9 364 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 RTN4Q9NQC3 1192 aaKnown RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 CALCOCO1Q9P1Z2 691 aa18.99■□□□□ 0.63
DDX39A-212ENST00000590260 XPO7Q9UIA9 1087 aaKnown RBP18.99■□□□□ 0.63
DDX39A-212ENST00000590260 ZFHX2Q9C0A1 2572 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 FRYLO94915 3013 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 SART1O43290 800 aaKnown RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 TSPAN3O60637 253 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 GRAP2O75791 330 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 HOXD9P28356 352 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 SOX5P35711 763 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 GABRB2P47870 512 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 TBX4P57082 545 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 NOMO3P69849 1222 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 MRPS21P82921 87 aaKnown RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 FMO1Q01740 532 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 C2CD6Q53TS8 623 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 C10orf76Q5T2E6 689 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 RNF43Q68DV7 783 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 GRAMD4Q6IC98 578 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 ZC3H14Q6PJT7 736 aaKnown RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 WDR5BQ86VZ2 330 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 LONP2Q86WA8 852 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 DEFB106AQ8N104 65 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 TXNDC5Q8NBS9 432 aaKnown RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 ATRIPQ8WXE1 791 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 ACOX2Q99424 681 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 NAT10Q9H0A0 1025 aaKnown RBP18.98■□□□□ 0.63
DDX39A-212ENST00000590260 CBX8Q9HC52 389 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 CD248Q9HCU0 757 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 MMP17Q9ULZ9 603 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 STARD13Q9Y3M8 1113 aa18.98■□□□□ 0.63
DDX39A-212ENST00000590260 MUC22E2RYF6 1773 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-212ENST00000590260 IRAK2O43187 625 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 KLF8O95600 359 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-212ENST00000590260 LATS1O95835 1130 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 LMNAP02545 664 aaKnown RBP18.97■□□□□ 0.63
DDX39A-212ENST00000590260 HARS2P49590 506 aaKnown RBP18.97■□□□□ 0.63
DDX39A-212ENST00000590260 DGKGP49619 791 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 NRLP54845 237 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 NNTQ13423 1086 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 GEN1Q17RS7 908 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 EGFLAMQ63HQ2 1017 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 TRNP1Q6NT89 227 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 RFWD3Q6PCD5 774 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 WFDC5Q8TCV5 224 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 PRICKLE1Q96MT3 831 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-212ENST00000590260 XPO6Q96QU8 1125 aaKnown RBP18.97■□□□□ 0.63
DDX39A-212ENST00000590260 PCDHB18PQ96TA0 734 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 SEMA4AQ9H3S1 761 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 ASNSD1Q9NWL6 643 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 SLC8A2Q9UPR5 921 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 TLR6Q9Y2C9 796 aa18.97■□□□□ 0.63
DDX39A-212ENST00000590260 SLC27A6Q9Y2P4 619 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms