RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 DENND1CQ8IV53 801 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 BBS7Q8IWZ6 715 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 TTC8Q8TAM2 541 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 CSGALNACT1Q8TDX6 532 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 RXFP2Q8WXD0 754 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 EBF3Q9H4W6 596 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 RRN3Q9NYV6 651 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 TLR6Q9Y2C9 796 aa23.37■■□□□ 1.33
R3HDM4-205ENST00000589445 TCRBV5S1A1TA0A578 114 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 SIGLEC16A6NMB1 481 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 SLC9A3R1O14745 358 aaPredicted RBP23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 APOEP02649 317 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 H2AFZP0C0S5 128 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 FECHP22830 423 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 RFC1P35251 1148 aaPredicted RBP23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 DEUP1Q05D60 604 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 TNK2Q07912 1038 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 NNTQ13423 1086 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 PDGFRLQ15198 375 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 SLC25A52Q3SY17 297 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 NUGGCQ68CJ6 796 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 PLEKHA7Q6IQ23 1121 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 H2AFVQ71UI9 128 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 CCDC170Q8IYT3 715 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 OSCP1Q8WVF1 389 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 IRF7Q92985 503 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 ATP2A3Q93084 1043 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 ARHGEF26Q96DR7 871 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 FCRL2Q96LA5 508 aaPredicted RBP23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 NPY6RQ99463 290 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 DDX23Q9BUQ8 820 aaKnown RBP23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 DCLK3Q9C098 648 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 MRPL47Q9HD33 250 aaKnown RBP23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 FBXL21Q9UKT6 434 aa23.36■■□□□ 1.33
R3HDM4-205ENST00000589445 C2CD4BA6NLJ0 364 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 PI4K2BG5E9Z4 385 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 IGLV3-25P01717 112 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 DESP17661 470 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 VCPP55072 806 aaKnown RBP23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 RPL7AP62424 266 aaKnown RBP23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 MAMLD1Q13495 774 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 SPA17Q15506 151 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 C15orf59Q2T9L4 293 aaPredicted RBP23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 PPP1R15BQ5SWA1 713 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 SND1Q7KZF4 910 aaKnown RBP eCLIP23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 CPA6Q8N4T0 437 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 TBC1D14Q9P2M4 693 aa23.35■■□□□ 1.33
R3HDM4-205ENST00000589445 KIAA1549LQ6ZVL6 1849 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 DCXO43602 365 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 NFATC1O95644 943 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 IGLV3-27P01718 113 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 RDXP35241 583 aaKnown RBP23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 PFKPQ01813 784 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 ZC3H12AQ5D1E8 599 aaKnown RBP23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 ARCQ7LC44 396 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 UBALD2Q8IYN6 164 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 DNASE1L2Q92874 299 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 NUP85Q9BW27 656 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 ADAM33Q9BZ11 813 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 SLC2A4RGQ9NR83 387 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 PIGVQ9NUD9 493 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 GTSE1Q9NYZ3 720 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 CALCOCO1Q9P1Z2 691 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 CA14Q9ULX7 337 aa23.34■■□□□ 1.33
R3HDM4-205ENST00000589445 PRR33A8MZF0 331 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 CCP110O43303 1012 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 NDUFA10O95299 355 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 KLKB1P03952 638 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 PTMAP06454 111 aaKnown RBP23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 PSMA2P25787 234 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 RING1Q06587 406 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 EML3Q32P44 896 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 CCDC14Q49A88 953 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 RAD9BQ6WBX8 426 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 Q6ZNB5 142 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 HTR3DQ70Z44 454 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 TMEM139Q8IV31 216 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 UNC45BQ8IWX7 931 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 FAM172AQ8WUF8 416 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 FAM83CQ9BQN1 747 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 TRIM7Q9C029 511 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 LINC00597Q9H2U6 94 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 LUC7LQ9NQ29 371 aaKnown RBP23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 HPS4Q9NQG7 708 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 CTTNBP2NLQ9P2B4 639 aa23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 AGO1Q9UL18 857 aaKnown RBP23.33■■□□□ 1.33
R3HDM4-205ENST00000589445 MYOFQ9NZM1 2061 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 ARNTLO00327 626 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 GREM1O60565 184 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 TMEM253P0C7T8 217 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 CCR1P32246 355 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 PTPN9P43378 593 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 SLC11A2P49281 568 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 ATXN1P54253 815 aaKnown RBP23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 ITPRIPL2Q3MIP1 535 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 HEBP1Q9NRV9 189 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 ANAPC7Q9UJX3 599 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 ZNF510Q9Y2H8 683 aa23.32■■□□□ 1.32
R3HDM4-205ENST00000589445 EIF3CLB5ME19 914 aaKnown RBP23.31■■□□□ 1.32
R3HDM4-205ENST00000589445 ADH1CP00326 375 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms