RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CCR1P32246 355 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 PCK1P35558 622 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 VIPR2P41587 438 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 PITX1P78337 314 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 ZXDBP98169 803 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 ATP11AP98196 1134 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 OGDHQ02218 1023 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 NME3Q13232 169 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 C15orf59Q2T9L4 293 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 BRMS1LQ5PSV4 323 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 TANGO2Q6ICL3 276 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 MFSD6LQ8IWD5 586 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 ADHFE1Q8IWW8 467 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 ADAMTS19Q8TE59 1207 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 SH3RF2Q8TEC5 729 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 FAM172AQ8WUF8 416 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 RNF34Q969K3 372 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 ASB2Q96Q27 587 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 TRIM7Q9C029 511 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 WDCPQ9H6R7 721 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 PIGVQ9NUD9 493 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 THG1LQ9NWX6 298 aaKnown RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 SMPD4Q9NXE4 827 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 IGSF9Q9P2J2 1179 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 LSM7Q9UK45 103 aaKnown RBP12.66□□□□□ -0.38
DNMT1-218ENST00000589294 TFR2Q9UP52 801 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 DUSP10Q9Y6W6 482 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 C5orf42Q9H799 3197 aa12.66□□□□□ -0.38
DNMT1-218ENST00000589294 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 CCP110O43303 1012 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 MSI1O43347 362 aaKnown RBP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 GREM1O60565 184 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 LATS1O95835 1130 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 BMP1P13497 986 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 IL9P15248 144 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 TFE3P19532 575 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 MAN1A1P33908 653 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 SLC1A1P43005 524 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 KCNQ1P51787 676 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 AIF1P55008 147 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 HDAC4P56524 1084 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 ZNF252P-AS1Q0IIN9 211 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 HTR4Q13639 388 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 ZNF77Q15935 545 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 ARL13BQ3SXY8 428 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 SH3PXD2AQ5TCZ1 1133 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 OTUD1Q5VV17 481 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 PARM1Q6UWI2 310 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 DEPDC1BQ8WUY9 529 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 BTN2A3PQ96KV6 586 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 FCRL2Q96LA5 508 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 ADAM33Q9BZ11 813 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 ARHGEF38Q9NXL2 777 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 CFAP97Q9P2B7 532 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 LIMD1Q9UGP4 676 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 SH3BP1Q9Y3L3 701 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
DNMT1-218ENST00000589294 OBSL1O75147 1896 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 MYO16Q9Y6X6 1858 aa12.65□□□□□ -0.38
DNMT1-218ENST00000589294 DENND4AQ7Z401 1863 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 SYNJ2BP-COX16A0A087WUM0 186 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 APOEP02649 317 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 KLKB1P03952 638 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 HMBSP08397 361 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 PSMC3P17980 439 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 ADRA1BP35368 520 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 SLC11A2P49281 568 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 NAP1L1P55209 391 aaKnown RBP12.64□□□□□ -0.39
DNMT1-218ENST00000589294 FCHO2Q0JRZ9 810 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 USP4Q13107 963 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 MESDQ14696 234 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 CDO1Q16878 200 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-218ENST00000589294 PSTKQ8IV42 348 aaKnown RBP12.64□□□□□ -0.39
DNMT1-218ENST00000589294 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 ATP6V0D2Q8N8Y2 350 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 FGF14Q92915 247 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 RSPRY1Q96DX4 576 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 BTBD6Q96KE9 485 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 C1orf74Q96LT6 269 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 HAPLN3Q96S86 360 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-218ENST00000589294 KCNK12Q9HB15 430 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 COX16Q9P0S2 106 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 SALL4Q9UJQ4 1053 aa12.64□□□□□ -0.39
DNMT1-218ENST00000589294 STOML2Q9UJZ1 356 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms