RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ABHD16BQ9H3Z7 469 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 GBA2Q9HCG7 927 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF232Q9UNY5 417 aa7.68□□□□□ -1.18
ZNF540-206ENST00000589117 CLUHO75153 1309 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 A0A1W2PPM1 405 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 A8MXQ7 604 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 KRT38O76015 456 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF286BP0CG31 522 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ALADP13716 330 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 GTF2A2P52657 109 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 BCAT1P54687 386 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 NCALDP61601 193 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 MOGSQ13724 837 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 CCDC14Q49A88 953 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 DUSP28Q4G0W2 176 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 TTC39BQ5VTQ0 682 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ANKRD22Q5VYY1 191 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 C1orf228Q6PIY5 440 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 MAMDC4Q6UXC1 1216 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 DLK2Q6UY11 383 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ACOT1Q86TX2 421 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 AGGF1Q8N302 714 aaeCLIP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 SLC35F5Q8WV83 523 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 MTBPQ96DY7 904 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 TNIP3Q96KP6 325 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF560Q96MR9 790 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 TRIM55Q9BYV6 548 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 MANSC1Q9H8J5 431 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 NOD2Q9HC29 1040 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 PNPLA8Q9NP80 782 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ARHGEF3Q9NR81 526 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 UBQLN1Q9UMX0 589 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 CHMP2BQ9UQN3 213 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 TEX264Q9Y6I9 313 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 POLR2AP24928 1970 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 NRCAMQ92823 1304 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 IGF2BP3O00425 579 aaKnown RBP eCLIP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ZBTB24O43167 697 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 GRAP2O75791 330 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 NPTXRO95502 500 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 APRTP07741 180 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 SNRPAP09012 282 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 CCNB1P14635 433 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 CCND1P24385 295 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 EPHX2P34913 555 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ADCYAP1R1P41586 468 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 PTPN9P43378 593 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 CDK16Q00536 496 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 BST2Q10589 180 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 MMRN1Q13201 1228 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 KCNJ11Q14654 390 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 TAF5Q15542 800 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 C15orf59Q2T9L4 293 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 SLC45A4Q5BKX6 768 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 PPP6R3Q5H9R7 873 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 EFHC1Q5JVL4 640 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ARHGAP17Q68EM7 881 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 SLC9A4Q6AI14 798 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 OLFML1Q6UWY5 402 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 CYP2U1Q7Z449 544 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ECHDC2Q86YB7 292 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 HACE1Q8IYU2 909 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 C7orf31Q8N865 590 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 C12orf29Q8N999 325 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 BANPQ8N9N5 519 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ANKRD52Q8NB46 1076 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 MCUQ8NE86 351 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 OR6J1Q8NGC5 347 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 DCAKDQ8WVC6 231 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 SLC44A1Q8WWI5 657 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 INPP5DQ92835 1189 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ZBTB10Q96DT7 871 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 IFT43Q96FT9 208 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 SNX25Q9H3E2 840 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 R3HDMLQ9H3Y0 253 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 C10orf88Q9H8K7 445 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 XAB2Q9HCS7 855 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ZC3H7BQ9UGR2 993 aaKnown RBP7.67□□□□□ -1.18
ZNF540-206ENST00000589117 GGT7Q9UJ14 662 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 ZNF180Q9UJW8 692 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 GINS2Q9Y248 185 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 HRH3Q9Y5N1 445 aa7.67□□□□□ -1.18
ZNF540-206ENST00000589117 TCRBV9S1A1TA0A576 114 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PDHXO00330 501 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 TMEM63AO94886 807 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 GNL1P36915 607 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 ARL4AP40617 200 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 RGS7P49802 495 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SLC1A5Q15758 541 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 KIZQ2M2Z5 673 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PARP6Q2NL67 630 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 KBTBD12Q3ZCT8 623 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 FBXO47Q5MNV8 452 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PMF1Q6P1K2 205 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 MOB2Q70IA6 237 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 JAZF1Q86VZ6 243 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PSTKQ8IV42 348 aaKnown RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CTAGE3PQ8IX95 158 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms