RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 NEK11Q8NG66 645 aa16.16■□□□□ 0.18
GCDH-208ENST00000588905 DDX1Q92499 740 aaKnown RBP16.16■□□□□ 0.18
GCDH-208ENST00000588905 GOLGA1Q92805 767 aa16.16■□□□□ 0.18
GCDH-208ENST00000588905 PLD4Q96BZ4 506 aa16.16■□□□□ 0.18
GCDH-208ENST00000588905 PCMTD1Q96MG8 357 aaPredicted RBP16.16■□□□□ 0.18
GCDH-208ENST00000588905 XPO6Q96QU8 1125 aaKnown RBP16.16■□□□□ 0.18
GCDH-208ENST00000588905 BBS2Q9BXC9 721 aa16.16■□□□□ 0.18
GCDH-208ENST00000588905 NLRC4Q9NPP4 1024 aa16.16■□□□□ 0.18
GCDH-208ENST00000588905 POLR3BQ9NW08 1133 aaPredicted RBP16.16■□□□□ 0.18
GCDH-208ENST00000588905 TJP2Q9UDY2 1190 aa16.16■□□□□ 0.18
GCDH-208ENST00000588905 SMG5Q9UPR3 1016 aaKnown RBP16.16■□□□□ 0.18
GCDH-208ENST00000588905 HBS1LQ9Y450 684 aaKnown RBP16.16■□□□□ 0.18
GCDH-208ENST00000588905 MYOFQ9NZM1 2061 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 CCDC163A0A0D9SF12 145 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 TBC1D3BA6NDS4 549 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 E5RJQ4 531 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 NEDD8-MDP1E9PL57 170 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 SART1O43290 800 aaKnown RBP16.15■□□□□ 0.18
GCDH-208ENST00000588905 CACNG3O60359 315 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 LTFP02788 710 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 TYRP14679 529 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 CHKAP35790 457 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 DMC1Q14565 340 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 TRIP4Q15650 581 aaPredicted RBP16.15■□□□□ 0.18
GCDH-208ENST00000588905 MSANTD2Q6P1R3 559 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 NOP9Q86U38 636 aaKnown RBP16.15■□□□□ 0.18
GCDH-208ENST00000588905 DENND1CQ8IV53 801 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 SFTPA1Q8IWL2 248 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 PHTF2Q8N3S3 785 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
GCDH-208ENST00000588905 CPXM1Q96SM3 734 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 DNAJC17Q9NVM6 304 aaKnown RBP16.15■□□□□ 0.18
GCDH-208ENST00000588905 DLL3Q9NYJ7 618 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 SFMBT1Q9UHJ3 866 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 AGO1Q9UL18 857 aaKnown RBP16.15■□□□□ 0.18
GCDH-208ENST00000588905 DAAM1Q9Y4D1 1078 aa16.15■□□□□ 0.18
GCDH-208ENST00000588905 HRO43593 1189 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 GFPT2O94808 682 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 CAVIN2O95810 425 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 SOX5P35711 763 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 HARS2P49590 506 aaKnown RBP16.14■□□□□ 0.17
GCDH-208ENST00000588905 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 HSF5Q4G112 596 aaPredicted RBP16.14■□□□□ 0.17
GCDH-208ENST00000588905 TAF3Q5VWG9 929 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 GRAMD4Q6IC98 578 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 TERB1Q8NA31 727 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 C1orf131Q8NDD1 294 aaKnown RBP16.14■□□□□ 0.17
GCDH-208ENST00000588905 PPP1R13BQ96KQ4 1090 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 PARD6AQ9NPB6 346 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 RAB23Q9ULC3 237 aa16.14■□□□□ 0.17
GCDH-208ENST00000588905 A0A1B0GTH6 734 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 ANTXRLA6NF34 631 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 TRIM24O15164 1050 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 APBB3O95704 486 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 TIE1P35590 1138 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 STAT1P42224 750 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 KIR2DL1P43626 348 aaPredicted RBP16.13■□□□□ 0.17
GCDH-208ENST00000588905 PXNP49023 591 aaPredicted RBP16.13■□□□□ 0.17
GCDH-208ENST00000588905 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
GCDH-208ENST00000588905 NR1I3Q14994 352 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 TAF5Q15542 800 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 FILIP1LQ4L180 1135 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 EMC10Q5UCC4 262 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 CPXM2Q8N436 756 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 CCDC33Q8N5R6 958 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 KCNV2Q8TDN2 545 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 EPS8L1Q8TE68 723 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 HHIPQ96QV1 700 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 SPAG5Q96R06 1193 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 HINFPQ9BQA5 517 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
GCDH-208ENST00000588905 FBXO10Q9UK96 956 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 MMP17Q9ULZ9 603 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 NAALADL1Q9UQQ1 740 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 SDK1Q7Z5N4 2213 aa16.13■□□□□ 0.17
GCDH-208ENST00000588905 AXIN1O15169 862 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 KLF8O95600 359 aaPredicted RBP16.12■□□□□ 0.17
GCDH-208ENST00000588905 PENKP01210 267 aaPredicted RBP16.12■□□□□ 0.17
GCDH-208ENST00000588905 ERBB2P04626 1255 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 CYBBP04839 570 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 MMEP08473 750 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 CISD3P0C7P0 127 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 CHRM1P11229 460 aaPredicted RBP16.12■□□□□ 0.17
GCDH-208ENST00000588905 NCAM1P13591 858 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 CHRNB2P17787 502 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 CDH5P33151 784 aaPredicted RBP16.12■□□□□ 0.17
GCDH-208ENST00000588905 SRSF5Q13243 272 aaKnown RBP16.12■□□□□ 0.17
GCDH-208ENST00000588905 PTPN20Q4JDL3 420 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 C10orf76Q5T2E6 689 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 FYB2Q5VWT5 728 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 SYPL2Q5VXT5 272 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 PRR23BQ6ZRT6 265 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 BEND5Q7L4P6 421 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 FAM217AQ8IXS0 508 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 ALLCQ8N6M5 410 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 IL17RCQ8NAC3 791 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 TXNDC5Q8NBS9 432 aaKnown RBP16.12■□□□□ 0.17
GCDH-208ENST00000588905 TMEM35BQ8NCS4 154 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 TSTD1Q8NFU3 115 aa16.12■□□□□ 0.17
GCDH-208ENST00000588905 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms