RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SLC39A13Q96H72 371 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 FCRL2Q96LA5 508 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 BRD9Q9H8M2 597 aa19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 DUS2Q9NX74 493 aaKnown RBP19.76■□□□□ 0.75
CLPTM1-209ENST00000588855 EIF3CLB5ME19 914 aaKnown RBP19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 ARNTLO00327 626 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 NDUFA10O95299 355 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 CYP1A2P05177 515 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 SRFP11831 508 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 IFNAR2P48551 515 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 KPNA1P52294 538 aaPredicted RBP19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 ATP11AP98196 1134 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 OGDHQ02218 1023 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 Q6ZNB5 142 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 HTR3DQ70Z44 454 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 OSCP1Q8WVF1 389 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 EIF3CQ99613 913 aaKnown RBP19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 FAM83CQ9BQN1 747 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 TRIM7Q9C029 511 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 LINC00597Q9H2U6 94 aa19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 EPN1Q9Y6I3 576 aaPredicted RBP19.75■□□□□ 0.75
CLPTM1-209ENST00000588855 ARSAP15289 507 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 GBP1P32455 592 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 PTPN9P43378 593 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 ATXN1P54253 815 aaKnown RBP19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 RING1Q06587 406 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 TNK2Q07912 1038 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 CDO1Q16878 200 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 RAB6CQ53S08 254 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 ZC3H12AQ5D1E8 599 aaKnown RBP19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 SH3PXD2AQ5TCZ1 1133 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 BNIPLQ7Z465 357 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 DENND1CQ8IV53 801 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 KIAA1958Q8N8K9 716 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 CTNNBL1Q8WYA6 563 aaPredicted RBP19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 PGAP3Q96FM1 320 aaPredicted RBP19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 PDLIM2Q96JY6 352 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 NUP85Q9BW27 656 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 RAB6CQ9H0N0 254 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 EBF3Q9H4W6 596 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 MRPL47Q9HD33 250 aaKnown RBP19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 HPS4Q9NQG7 708 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 PIGVQ9NUD9 493 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 AGO1Q9UL18 857 aaKnown RBP19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 MYOFQ9NZM1 2061 aa19.74■□□□□ 0.75
CLPTM1-209ENST00000588855 TMEM191CA6NGB0 347 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 CCP110O43303 1012 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 TMEM253P0C7T8 217 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 HARS2P49590 506 aaKnown RBP19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 ZNF143P52747 638 aaPredicted RBP19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 DEUP1Q05D60 604 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 ZNF252P-AS1Q0IIN9 211 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 PDGFRLQ15198 375 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 EML3Q32P44 896 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 NUGGCQ68CJ6 796 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 IRF7Q92985 503 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 DCLK3Q9C098 648 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 SLC2A4RGQ9NR83 387 aa19.73■□□□□ 0.75
CLPTM1-209ENST00000588855 MOCS2O96007 188 aaPredicted RBP19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 MAGEA1P43355 309 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 SPA17Q15506 151 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 C10orf76Q5T2E6 689 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 LRRC8AQ8IWT6 810 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 UNC45BQ8IWX7 931 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 ACRBPQ8NEB7 543 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 FAM172AQ8WUF8 416 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 GTSE1Q9NYZ3 720 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 TBC1D14Q9P2M4 693 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 REXO2Q9Y3B8 237 aaKnown RBP19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 PCDHA13Q9Y5I0 950 aa19.72■□□□□ 0.75
CLPTM1-209ENST00000588855 SLC9A3R1O14745 358 aaPredicted RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 ENDOD1O94919 500 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 APOEP02649 317 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 CCR1P32246 355 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 RDXP35241 583 aaKnown RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 CXCR3P49682 368 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 IER5LQ5T953 404 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 TTC8Q8TAM2 541 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 ZNF564Q8TBZ8 553 aaPredicted RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 ATP2A3Q93084 1043 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 RNF34Q969K3 372 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 CNPY3Q9BT09 278 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 CTTNBP2NLQ9P2B4 639 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 XPO7Q9UIA9 1087 aaKnown RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 INTUQ9ULD6 942 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 TFR2Q9UP52 801 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 OTOL1A6NHN0 477 aaPredicted RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 F9P00740 461 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 PSMA2P25787 234 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 VCPP55072 806 aaKnown RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 RUNX3Q13761 415 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 PPP2R5DQ14738 602 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 STRADAQ7RTN6 431 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 FAM131BQ86XD5 332 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 UBALD2Q8IYN6 164 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 CCDC112Q8NEF3 446 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 FNIP1Q8TF40 1166 aa19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 CENPIQ92674 756 aaPredicted RBP19.71■□□□□ 0.75
CLPTM1-209ENST00000588855 DNASE1L2Q92874 299 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms