RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 LRRC45Q96CN5 670 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 HAPLN3Q96S86 360 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
TMED1-204ENST00000588289 DCLK3Q9C098 648 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 CATSPERBQ9H7T0 1116 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 CXXC1Q9P0U4 656 aaPredicted RBP13.16□□□□□ -0.3
TMED1-204ENST00000588289 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 FBXW11Q9UKB1 542 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 MAGED2Q9UNF1 606 aaPredicted RBP13.16□□□□□ -0.3
TMED1-204ENST00000588289 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
TMED1-204ENST00000588289 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 IRAK3Q9Y616 596 aa13.16□□□□□ -0.3
TMED1-204ENST00000588289 A0A1W2PQH9 124 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 SMAPO00193 183 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 PPP1R12AO14974 1030 aaPredicted RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 FGF10O15520 208 aaPredicted RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 RAD51CO43502 376 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 ITGAVP06756 1048 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 RARGP13631 454 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 PFKLP17858 780 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 IL1R2P27930 398 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 STIP1P31948 543 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 ATP5C1P36542 298 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 HCAR3P49019 387 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 TAF10Q12962 218 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 HLTFQ14527 1009 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMED1-204ENST00000588289 TAZQ16635 292 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 ANKRD20A8PQ5CZ79 823 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 C10orf120Q5SQS8 335 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 SYPL2Q5VXT5 272 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 TRNP1Q6NT89 227 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 EMBQ6PCB8 327 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 HFE2Q6ZVN8 426 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 BNIPLQ7Z465 357 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 CDKL3Q8IVW4 592 aaPredicted RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 PRELID2Q8N945 189 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 ANKRD7Q92527 254 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 BRD8Q9H0E9 1235 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 ANKZF1Q9H8Y5 726 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 PCDH18Q9HCL0 1135 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 EPB41L5Q9HCM4 733 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 PIGVQ9NUD9 493 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 TMEM30AQ9NV96 361 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 GMIPQ9P107 970 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 ASIC3Q9UHC3 531 aa13.15□□□□□ -0.3
TMED1-204ENST00000588289 HBS1LQ9Y450 684 aaKnown RBP13.15□□□□□ -0.3
TMED1-204ENST00000588289 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.31
TMED1-204ENST00000588289 SGK1O00141 431 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 TEX28O15482 410 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 MTSS1O43312 755 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 LIASO43766 372 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 KRT10P13645 584 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 MX2P20592 715 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 CDC25CP30307 473 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 L1CAMP32004 1257 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
TMED1-204ENST00000588289 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
TMED1-204ENST00000588289 TBX4P57082 545 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 DYNLT1P63172 113 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 COG7P83436 770 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 RING1Q06587 406 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 XRCC4Q13426 336 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 ATP13A4Q4VNC1 1196 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 RASIP1Q5U651 963 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 CPNE8Q86YQ8 564 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 ARFGAP1Q8N6T3 406 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 LEMD2Q8NC56 503 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 NDRG1Q92597 394 aaKnown RBP13.14□□□□□ -0.31
TMED1-204ENST00000588289 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
TMED1-204ENST00000588289 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 MYRFLQ96LU7 910 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 ERP44Q9BS26 406 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 LMAN2LQ9H0V9 348 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 PLEKHA4Q9H4M7 779 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 RETREG1Q9H6L5 497 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 HAUS2Q9NVX0 235 aa13.14□□□□□ -0.31
TMED1-204ENST00000588289 MARCH2Q9P0N8 246 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms