RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 ATXN3LQ9H3M9 355 aa16.82■□□□□ 0.28
NLE1-204ENST00000588019 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
NLE1-204ENST00000588019 PIDD1Q9HB75 910 aa16.82■□□□□ 0.28
NLE1-204ENST00000588019 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
NLE1-204ENST00000588019 ARHGEF38Q9NXL2 777 aa16.82■□□□□ 0.28
NLE1-204ENST00000588019 DNMT3BQ9UBC3 853 aaKnown RBP16.82■□□□□ 0.28
NLE1-204ENST00000588019 SLC12A6Q9UHW9 1150 aa16.82■□□□□ 0.28
NLE1-204ENST00000588019 SLC12A8A0AV02 714 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 PGRMC1O00264 195 aaKnown RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 MSI1O43347 362 aaKnown RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 COCHO43405 550 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 APOEP02649 317 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 RHOP08100 348 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 DDX6P26196 483 aaKnown RBP eCLIP16.81■□□□□ 0.28
NLE1-204ENST00000588019 PTPN7P35236 360 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 ZNF135P52742 658 aaPredicted RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 CDH6P55285 790 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 HYAL1Q12794 435 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 KRT81Q14533 505 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 PPP2R5EQ16537 467 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 DPYSL2Q16555 572 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 ARHGAP15Q53QZ3 475 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 ZC3H12AQ5D1E8 599 aaKnown RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 PRPF38BQ5VTL8 546 aaKnown RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 SPOCD1Q6ZMY3 1216 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 MIB1Q86YT6 1006 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 CEP112Q8N8E3 955 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 FAM71BQ8TC56 605 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 MAIP1Q8WWC4 291 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 SMG7Q92540 1137 aaKnown RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 RAPGEF5Q92565 580 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 ZNF707Q96C28 371 aaPredicted RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 SLC39A13Q96H72 371 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 HAPLN3Q96S86 360 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 TKTL2Q9H0I9 626 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 PRDM12Q9H4Q4 367 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 DHX35Q9H5Z1 703 aaKnown RBP16.81■□□□□ 0.28
NLE1-204ENST00000588019 ZMYM5Q9UJ78 669 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 EFR3BQ9Y2G0 817 aa16.81■□□□□ 0.28
NLE1-204ENST00000588019 CLUHO75153 1309 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 A0A1W2PRU2 124 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 C2orf78A6NCI8 922 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 ZNF487B1APH4 448 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 PI4K2BG5E9Z4 385 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 IGLV3-27P01718 113 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 POU3F3P20264 500 aaPredicted RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 ARSEP51690 589 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 LONRF2Q1L5Z9 754 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 TFDP3Q5H9I0 405 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 ACBD5Q5T8D3 534 aaPredicted RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 NUGGCQ68CJ6 796 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 MFSD7Q6UXD7 560 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 UNC45BQ8IWX7 931 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 ATP6V0D2Q8N8Y2 350 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 VN1R2Q8NFZ6 395 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 MS4A14Q96JA4 679 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 FCRL2Q96LA5 508 aaPredicted RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 OSBPL8Q9BZF1 889 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 OSBPL2Q9H1P3 480 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 TRPC7Q9HCX4 862 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 KLHL11Q9NVR0 708 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 GPATCH2LQ9NWQ4 482 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 HCFC1R1Q9NWW0 138 aa16.8■□□□□ 0.28
NLE1-204ENST00000588019 RCOR3Q9P2K3 495 aaPredicted RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 MTCL1Q9Y4B5 1905 aaKnown RBP16.8■□□□□ 0.28
NLE1-204ENST00000588019 TRAV19A0A0A6YYK7 116 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 C3orf70A6NLC5 250 aaPredicted RBP16.79■□□□□ 0.28
NLE1-204ENST00000588019 KCNU1A8MYU2 1149 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 OLFM2O95897 454 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 FGGP02679 453 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
NLE1-204ENST00000588019 HDCP19113 662 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 L1CAMP32004 1257 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 GTF2F1P35269 517 aaKnown RBP eCLIP16.79■□□□□ 0.28
NLE1-204ENST00000588019 CDKN2BP42772 138 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
NLE1-204ENST00000588019 CYP4F8P98187 520 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 TAZQ16635 292 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 CA9Q16790 459 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 TXNDC8Q6A555 127 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 GRASPQ7Z6J2 395 aaPredicted RBP16.79■□□□□ 0.28
NLE1-204ENST00000588019 SLC13A5Q86YT5 568 aaPredicted RBP16.79■□□□□ 0.28
NLE1-204ENST00000588019 PLD4Q96BZ4 506 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 RPGRIP1Q96KN7 1286 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 ZNF670Q9BS34 389 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 CALN1Q9BXU9 219 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 RNF38Q9H0F5 515 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 PRDM16Q9HAZ2 1276 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 PCDH18Q9HCL0 1135 aa16.79■□□□□ 0.28
NLE1-204ENST00000588019 ZNF638Q14966 1978 aaKnown RBP16.78■□□□□ 0.28
NLE1-204ENST00000588019 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
NLE1-204ENST00000588019 H3BRJ5 948 aa16.78■□□□□ 0.28
NLE1-204ENST00000588019 TJP3O95049 919 aa16.78■□□□□ 0.28
NLE1-204ENST00000588019 MBL2P11226 248 aaPredicted RBP16.78■□□□□ 0.28
NLE1-204ENST00000588019 ARL4AP40617 200 aa16.78■□□□□ 0.28
NLE1-204ENST00000588019 ADAM15Q13444 863 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms