RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 SPATA13Q96N96 652 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 KCTD15Q96SI1 283 aaPredicted RBP20.49■□□□□ 0.87
MBD1-216ENST00000587605 NAT9Q9BTE0 207 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 KATNBL1Q9H079 304 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 ADAMTS10Q9H324 1103 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 SMYD2Q9NRG4 433 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.49■□□□□ 0.87
MBD1-216ENST00000587605 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 MOCS1Q9NZB8 636 aa20.49■□□□□ 0.87
MBD1-216ENST00000587605 SF3B1O75533 1304 aaKnown RBP eCLIP20.48■□□□□ 0.879e-6■■■■■ 68.9
MBD1-216ENST00000587605 FCHO1O14526 889 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 DGKIO75912 1065 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 ALDH1A2O94788 518 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 CSH1P0DML2 217 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 CSH2P0DML3 217 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 AXLP30530 894 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 HOXA11P31270 313 aaPredicted RBP20.48■□□□□ 0.87
MBD1-216ENST00000587605 OCRLQ01968 901 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 NAA25Q14CX7 972 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 SOWAHAQ2M3V2 549 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 ALKAL1Q6UXT8 129 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 CDHR3Q6ZTQ4 885 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 MARK2Q7KZI7 788 aaKnown RBP20.48■□□□□ 0.87
MBD1-216ENST00000587605 CATSPER4Q7RTX7 472 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 CRLF3Q8IUI8 442 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 TEX9Q8N6V9 391 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 ZMAT2Q96NC0 199 aaKnown RBP20.48■□□□□ 0.87
MBD1-216ENST00000587605 OLFM3Q96PB7 478 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 MIPEPQ99797 713 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 MTMR10Q9NXD2 777 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 GDAP2Q9NXN4 497 aa20.48■□□□□ 0.87
MBD1-216ENST00000587605 NKX1-2Q9UD57 310 aaPredicted RBP20.48■□□□□ 0.87
MBD1-216ENST00000587605 GSC2O15499 205 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 OPHN1O60890 802 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 GCKP35557 465 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 SLC10A2Q12908 348 aaPredicted RBP20.47■□□□□ 0.87
MBD1-216ENST00000587605 TAF11Q15544 211 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 DGKDQ16760 1214 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 PLCD3Q8N3E9 789 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 ARMC2Q8NEN0 867 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 ZC3H15Q8WU90 426 aaKnown RBP20.47■□□□□ 0.87
MBD1-216ENST00000587605 HTR3CQ8WXA8 447 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 CDKL2Q92772 493 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 MCUR1Q96AQ8 359 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 B3GNT5Q9BYG0 378 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 TUBGCP4Q9UGJ1 667 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 NME7Q9Y5B8 376 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 NUMBLQ9Y6R0 609 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 KAT6AQ92794 2004 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 PDCD11Q14690 1871 aaKnown RBP20.47■□□□□ 0.87
MBD1-216ENST00000587605 PPEF2O14830 753 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 KIF1CO43896 1103 aaKnown RBP20.47■□□□□ 0.87
MBD1-216ENST00000587605 BPGMP07738 259 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 MMP3P08254 477 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 GM2AP17900 193 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 ADCYAP1R1P41586 468 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 BST1Q10588 318 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 NBPF20Q3BBV1 942 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 TEX44Q53QW1 395 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 FBXO47Q5MNV8 452 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 NCBP2-AS2Q69YL0 99 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 NDUFAF2Q8N183 169 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 SNX25Q9H3E2 840 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 DTLQ9NZJ0 730 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 STOML1Q9UBI4 398 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 SLC45A1Q9Y2W3 748 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 USP3Q9Y6I4 520 aa20.47■□□□□ 0.87
MBD1-216ENST00000587605 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 SNNO75324 88 aaPredicted RBP20.46■□□□□ 0.87
MBD1-216ENST00000587605 GNL1P36915 607 aaPredicted RBP20.46■□□□□ 0.87
MBD1-216ENST00000587605 MATKP42679 507 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 CHI3L2Q15782 390 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 LRRC8BQ6P9F7 803 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 MOB2Q70IA6 237 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 MIEF2Q96C03 454 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 FBXO6Q9NRD1 293 aaPredicted RBP20.46■□□□□ 0.87
MBD1-216ENST00000587605 SORCS3Q9UPU3 1222 aa20.46■□□□□ 0.87
MBD1-216ENST00000587605 SDR42E2A6NKP2 422 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 H3BRJ5 948 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 PIRO00625 290 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 DAB1O75553 588 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 RARBP10826 455 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 WASHC5Q12768 1159 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 KIZQ2M2Z5 673 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 TSNAXIP1Q2TAA8 658 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 SLC25A52Q3SY17 297 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 C7orf31Q8N865 590 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 STKLD1Q8NE28 680 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 NAF1Q96HR8 494 aaKnown RBP20.45■□□□□ 0.86
MBD1-216ENST00000587605 TNIP3Q96KP6 325 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 SLC13A1Q9BZW2 595 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 STN1Q9H668 368 aaKnown RBP20.45■□□□□ 0.86
MBD1-216ENST00000587605 PCMTD2Q9NV79 361 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 FZD10Q9ULW2 581 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 FAM237BA0A1B0GVD1 139 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 XPO1O14980 1071 aaKnown RBP20.45■□□□□ 0.86
MBD1-216ENST00000587605 MAP3K6O95382 1288 aa20.45■□□□□ 0.86
MBD1-216ENST00000587605 TFE3P19532 575 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms