RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 UBXN6Q9BZV1 441 aa14.76□□□□□ -0.05
DNMT1-213ENST00000587604 NIF3L1Q9GZT8 377 aa14.76□□□□□ -0.05
DNMT1-213ENST00000587604 MKRN2Q9H000 416 aaKnown RBP14.76□□□□□ -0.05
DNMT1-213ENST00000587604 GOLGA4Q13439 2230 aaKnown RBP14.76□□□□□ -0.05
DNMT1-213ENST00000587604 A0A1B0GTW7 788 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 SYNCRIPO60506 623 aaKnown RBP14.75□□□□□ -0.05
DNMT1-213ENST00000587604 CAPNS1P04632 268 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 NCAM1P13591 858 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 CMA1P23946 247 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 NR2F2P24468 414 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 OXTRP30559 389 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 CORO1AP31146 461 aaKnown RBP14.75□□□□□ -0.05
DNMT1-213ENST00000587604 IL12RB1P42701 662 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 DNM1Q05193 864 aaKnown RBP14.75□□□□□ -0.05
DNMT1-213ENST00000587604 PPP3CAQ08209 521 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 EFEMP1Q12805 493 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 GRIK2Q13002 908 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 TMPRSS6Q8IU80 811 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 ARHGAP18Q8N392 663 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 CCDC150Q8NCX0 1101 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 ADAMTS14Q8WXS8 1223 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 FAXDC2Q96IV6 333 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 PIWIL1Q96J94 861 aaKnown RBP14.75□□□□□ -0.05
DNMT1-213ENST00000587604 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
DNMT1-213ENST00000587604 GPR174Q9BXC1 333 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 RASAL2Q9UJF2 1139 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 AGO1Q9UL18 857 aaKnown RBP14.75□□□□□ -0.05
DNMT1-213ENST00000587604 NUMA1Q14980 2115 aa14.75□□□□□ -0.05
DNMT1-213ENST00000587604 KNTC1P50748 2209 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 PLXNB3Q9ULL4 1909 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 APC2O95996 2303 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 A0A1B0GVL5 298 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 MEI4A8MW99 385 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 KCNJ18B7U540 433 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 TIMM44O43615 452 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 IGLV3-19P01714 112 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 CYBBP04839 570 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 HMBSP08397 361 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 FTH1P19P0C7X4 201 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 TRIM49P0CI25 452 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 TRIM49CP0CI26 452 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 KRT13P13646 458 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 PFKFB1P16118 471 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 RPL13P26373 211 aaKnown RBP14.74□□□□□ -0.05
DNMT1-213ENST00000587604 TPMTP51580 245 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 RING1Q06587 406 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 EIF4HQ15056 248 aaKnown RBP14.74□□□□□ -0.05
DNMT1-213ENST00000587604 ZNF394Q53GI3 561 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 ANKS1BQ7Z6G8 1248 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 NAXDQ8IW45 347 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 CPXM2Q8N436 756 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 PRCCQ92733 491 aaPredicted RBP14.74□□□□□ -0.05
DNMT1-213ENST00000587604 SIPA1Q96FS4 1042 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 NUP58Q9BVL2 599 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 SLC2A11Q9BYW1 496 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 ELOVL2Q9NXB9 296 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 STRIP2Q9ULQ0 834 aa14.74□□□□□ -0.05
DNMT1-213ENST00000587604 METTL12A8MUP2 240 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 TAF4O00268 1085 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 RHOBTB3O94955 611 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 GTF2H1P32780 548 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 PSMC2P35998 433 aaKnown RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 MCCD1P59942 119 aaPredicted RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 ADAM9Q13443 819 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 ZNF234Q14588 700 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 RAB41Q5JT25 222 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 DCAF12L1Q5VU92 463 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 RSRC2Q7L4I2 434 aaKnown RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 GLRX5Q86SX6 157 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 PROSER1Q86XN7 944 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 DENND1CQ8IV53 801 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 FAM186BQ8IYM0 893 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 ZCCHC9Q8N567 271 aaKnown RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 RBBP8NLQ8NC74 664 aaPredicted RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 DDI1Q8WTU0 396 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 CCDC47Q96A33 483 aaKnown RBP14.73□□□□□ -0.05
DNMT1-213ENST00000587604 MIR1-1HGQ9H1L0 117 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 MMRN2Q9H8L6 949 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 TMEM8AQ9HCN3 771 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 MARCH2Q9P0N8 246 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 CLEC4EQ9ULY5 219 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 LHX6Q9UPM6 363 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 HPSEQ9Y251 543 aa14.73□□□□□ -0.05
DNMT1-213ENST00000587604 NBEAQ8NFP9 2946 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 SLC12A8A0AV02 714 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 BCAT2O15382 392 aaPredicted RBP14.72□□□□□ -0.05
DNMT1-213ENST00000587604 CBFA2T3O75081 653 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 ZNF883P0CG24 379 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 ACADMP11310 421 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 HOXB3P14651 431 aaPredicted RBP14.72□□□□□ -0.05
DNMT1-213ENST00000587604 COPAP53621 1224 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 YWHAGP61981 247 aaKnown RBP eCLIP14.72□□□□□ -0.05
DNMT1-213ENST00000587604 SCAPQ12770 1279 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 PKP1Q13835 747 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 COL9A2Q14055 689 aaPredicted RBP14.72□□□□□ -0.05
DNMT1-213ENST00000587604 ARHGAP17Q68EM7 881 aa14.72□□□□□ -0.05
DNMT1-213ENST00000587604 KRT39Q6A163 491 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms