RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 L1CAMP32004 1257 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 PLTPP55058 493 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 ROR1Q01973 937 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 UBE3AQ05086 875 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 FAM131BQ86XD5 332 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 ALLCQ8N6M5 410 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 TTC9BQ8N6N2 239 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 ATAD1Q8NBU5 361 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 GDPD5Q8WTR4 605 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 ART4Q93070 314 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 FMO2Q99518 471 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 ZNF670Q9BS34 389 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 AP4E1Q9UPM8 1137 aa21.24■□□□□ 0.99
ATG4D-204ENST00000586417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 ITGAVP06756 1048 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 RDXP35241 583 aaKnown RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 LMNB2Q03252 620 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 GPR17Q13304 367 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 TFDP2Q14188 446 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 TRIP13Q15645 432 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 NFE2Q16621 373 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 PQLC3Q8N755 202 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 FUBP3Q96I24 572 aaKnown RBP eCLIP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 MAGEB5Q9BZ81 275 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 TXLNGYQ9BZA5 131 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 CRISPLD1Q9H336 500 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 ABI2Q9NYB9 513 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 WHRNQ9P202 907 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 ASIC3Q9UHC3 531 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 ZNF148Q9UQR1 794 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 C2orf71A6NGG8 1288 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 H3BQF6 201 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 M0QYT0 321 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 AGPSO00116 658 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 SLC5A3P53794 718 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 LRIT3Q3SXY7 679 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 ANKRD20A8PQ5CZ79 823 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 TMC3Q7Z5M5 1100 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 MRPL43Q8N983 215 aaKnown RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 GLIS1Q8NBF1 620 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 PCDH19Q8TAB3 1148 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 SCAMP5Q8TAC9 235 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 MICAL1Q8TDZ2 1067 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 PGAP3Q96FM1 320 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 KCTD15Q96SI1 283 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 FAM129AQ9BZQ8 928 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 ACBD3Q9H3P7 528 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 DHX35Q9H5Z1 703 aaKnown RBP21.23■□□□□ 0.99
ATG4D-204ENST00000586417 RXFP1Q9HBX9 757 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 PIGVQ9NUD9 493 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 FZD10Q9ULW2 581 aa21.23■□□□□ 0.99
ATG4D-204ENST00000586417 CAPN9O14815 690 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 GRIK1P39086 918 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 PRUNE1Q86TP1 453 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 PSTKQ8IV42 348 aaKnown RBP21.22■□□□□ 0.99
ATG4D-204ENST00000586417 ZBTB9Q96C00 473 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 MAK16Q9BXY0 300 aaKnown RBP21.22■□□□□ 0.99
ATG4D-204ENST00000586417 OXCT2Q9BYC2 517 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-204ENST00000586417 FNIP2Q9P278 1114 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 IRAK3Q9Y616 596 aa21.22■□□□□ 0.99
ATG4D-204ENST00000586417 MTMR11A4FU01 709 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 KRT14P02533 472 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 NCAM1P13591 858 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 DEUP1Q05D60 604 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 NOMO1Q15155 1222 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 UAP1Q16222 522 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-204ENST00000586417 PPP6R3Q5H9R7 873 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-204ENST00000586417 VSTM1Q6UX27 236 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 NPNTQ6UXI9 565 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 GPR65Q8IYL9 337 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 IQCKQ8N0W5 287 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 PLD5Q8N7P1 536 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 CCDC89Q8N998 374 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 SLC7A14Q8TBB6 771 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 SNF8Q96H20 258 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 WDR6Q9NNW5 1121 aaKnown RBP21.21■□□□□ 0.99
ATG4D-204ENST00000586417 RRN3Q9NYV6 651 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 SLC27A5Q9Y2P5 690 aa21.21■□□□□ 0.99
ATG4D-204ENST00000586417 A0A1W2PPC1 479 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 PPFIA2O75334 1257 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 ABLIM3O94929 683 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 ATF2P15336 505 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 ITIH2P19823 946 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 BSPRYQ5W0U4 402 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 RHBDF2Q6PJF5 856 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 BEND5Q7L4P6 421 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 GSTA5Q7RTV2 222 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 ADAM32Q8TC27 787 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 EDEM1Q92611 657 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 LRRC45Q96CN5 670 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 C8orf48Q96LL4 319 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 KLHL5Q96PQ7 755 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 TMEM121Q9BTD3 319 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.2■□□□□ 0.99
ATG4D-204ENST00000586417 PCDHB5Q9Y5E4 795 aa21.2■□□□□ 0.99
ATG4D-204ENST00000586417 PLXNA3P51805 1871 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 SYNJ2BP-COX16A0A087WUM0 186 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 GOLGA6BA6NDN3 693 aa21.2■□□□□ 0.98
ATG4D-204ENST00000586417 LPXNO60711 386 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms