RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DBX2Q6ZNG2 339 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 INTS8Q75QN2 995 aaKnown RBP15.19■□□□□ 0.02
SDF2-202ENST00000585428 TMPRSS6Q8IU80 811 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 C1orf216Q8TAB5 229 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 ADAMTS14Q8WXS8 1223 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 HEXIM2Q96MH2 286 aaKnown RBP15.19■□□□□ 0.02
SDF2-202ENST00000585428 CDK5RAP1Q96SZ6 601 aaKnown RBP15.19■□□□□ 0.02
SDF2-202ENST00000585428 DCLK3Q9C098 648 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 ELOVL2Q9NXB9 296 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 CLEC4EQ9ULY5 219 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 HPSEQ9Y251 543 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 A0A1B0GTW7 788 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 TIMM44O43615 452 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 RHOBTB3O94955 611 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 CD58P19256 250 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 OXTRP30559 389 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 COPAP53621 1224 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 GRIK2Q13002 908 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 PKP1Q13835 747 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 STARD3Q14849 445 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 TMEM215Q68D42 235 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 PM20D1Q6GTS8 502 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 GLRX5Q86SX6 157 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 FAM217AQ8IXS0 508 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 CPXM2Q8N436 756 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 NUP58Q9BVL2 599 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 GPR174Q9BXC1 333 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 SLC2A11Q9BYW1 496 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 IMPG2Q9BZV3 1241 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 NIF3L1Q9GZT8 377 aa15.18■□□□□ 0.02
SDF2-202ENST00000585428 PI4KAP42356 2102 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 KIF20AO95235 890 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 TRIM49P0CI25 452 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 TRIM49CP0CI26 452 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 NCAM1P13591 858 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 PFKFB1P16118 471 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 NR2F2P24468 414 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 CORO1AP31146 461 aaKnown RBP15.17■□□□□ 0.02
SDF2-202ENST00000585428 GTF2H1P32780 548 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 BNC1Q01954 994 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 EFEMP1Q12805 493 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 COL9A2Q14055 689 aaPredicted RBP15.17■□□□□ 0.02
SDF2-202ENST00000585428 ZNF234Q14588 700 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 E2F5Q15329 346 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 ZNF394Q53GI3 561 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 CCNI2Q6ZMN8 369 aaPredicted RBP15.17■□□□□ 0.02
SDF2-202ENST00000585428 SLCO6A1Q86UG4 719 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 PROSER1Q86XN7 944 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 DENND1CQ8IV53 801 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 NAXDQ8IW45 347 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 PNPLA1Q8N8W4 532 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 SLC4A11Q8NBS3 891 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 UCMAQ8WVF2 138 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 SIPA1Q96FS4 1042 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 TMEM176AQ96HP8 235 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 TMEM8AQ9HCN3 771 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 MARCH2Q9P0N8 246 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 KIAA1522Q9P206 1035 aaPredicted RBP15.17■□□□□ 0.02
SDF2-202ENST00000585428 PCDHB9Q9Y5E1 797 aa15.17■□□□□ 0.02
SDF2-202ENST00000585428 SYNCRIPO60506 623 aaKnown RBP15.16■□□□□ 0.02
SDF2-202ENST00000585428 HMBSP08397 361 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 FTH1P19P0C7X4 201 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 ZNF883P0CG24 379 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 PSMC2P35998 433 aaKnown RBP15.16■□□□□ 0.02
SDF2-202ENST00000585428 RAD23BP54727 409 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 ADAM9Q13443 819 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 TRIP4Q15650 581 aaPredicted RBP15.16■□□□□ 0.02
SDF2-202ENST00000585428 DCAF12L1Q5VU92 463 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 ARHGAP17Q68EM7 881 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 KRT39Q6A163 491 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 PIGZQ86VD9 579 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 FAM186BQ8IYM0 893 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 ARHGAP18Q8N392 663 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 ANKRD52Q8NB46 1076 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 SORCS1Q8WY21 1168 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 PRCCQ92733 491 aaPredicted RBP15.16■□□□□ 0.02
SDF2-202ENST00000585428 DNAI2Q9GZS0 605 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 IL21RQ9HBE5 538 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 RASAL2Q9UJF2 1139 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 PCOLCE2Q9UKZ9 415 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 MAPK8IP1Q9UQF2 711 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 NBEAQ8NFP9 2946 aa15.16■□□□□ 0.02
SDF2-202ENST00000585428 CACNA1EQ15878 2313 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 SLC12A8A0AV02 714 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 BCAT2O15382 392 aaPredicted RBP15.15■□□□□ 0.02
SDF2-202ENST00000585428 CYBBP04839 570 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 KRT13P13646 458 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 PRKCHP24723 683 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 RPL13P26373 211 aaKnown RBP15.15■□□□□ 0.02
SDF2-202ENST00000585428 YWHAGP61981 247 aaKnown RBP eCLIP15.15■□□□□ 0.02
SDF2-202ENST00000585428 SCAPQ12770 1279 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 DPYDQ12882 1025 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 EIF4HQ15056 248 aaKnown RBP15.15■□□□□ 0.02
SDF2-202ENST00000585428 BHLHA9Q7RTU4 235 aa15.15■□□□□ 0.02
SDF2-202ENST00000585428 ANKS1BQ7Z6G8 1248 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms