RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 RNF8O76064 485 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 ENDOD1O94919 500 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 GJB6O95452 261 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 ACAT1P24752 427 aaKnown RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 PSMA2P25787 234 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 ADORA2BP29275 332 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 RGS7P49802 495 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 TSPY1Q01534 308 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 ADCY1Q08828 1119 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 NFE2Q16621 373 aaPredicted RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 LONRF2Q1L5Z9 754 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 PM20D1Q6GTS8 502 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 VSIG1Q86XK7 387 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 LRRC43Q8N309 656 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 IRGQQ8WZA9 623 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 NT5C3BQ969T7 300 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 SMARCD1Q96GM5 515 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
GGA3-217ENST00000583667 RBM41Q96IZ5 413 aaKnown RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 RUNDC3BQ96NL0 473 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 SMOQ99835 787 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 TMEM121BQ9BXQ6 578 aaPredicted RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 FAM126AQ9BYI3 521 aaPredicted RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 OSBPL6Q9BZF3 934 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 ZCWPW1Q9H0M4 648 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 WDR6Q9NNW5 1121 aaKnown RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 HOMER3Q9NSC5 361 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 TMEM51Q9NW97 253 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 EHD2Q9NZN4 543 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 DNAJB4Q9UDY4 337 aa12.46□□□□□ -0.41
GGA3-217ENST00000583667 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.46□□□□□ -0.41
GGA3-217ENST00000583667 V9GYY5 206 aaPredicted RBP12.46□□□□□ -0.41
GGA3-217ENST00000583667 SMG1Q96Q15 3661 aaKnown RBP12.46□□□□□ -0.42
GGA3-217ENST00000583667 SF3B1O75533 1304 aaKnown RBP eCLIP12.45□□□□□ -0.42
GGA3-217ENST00000583667 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 FAM170AA1A519 330 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 HHLA1C9JL84 531 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 ANHXE9PGG2 379 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 I3L4J1 428 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 HSF2BPO75031 334 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 CTSAP10619 480 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 PDGFRAP16234 1089 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 TNFRSF8P28908 595 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 MAGEA11P43364 429 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 SLC11A1P49279 550 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 DNA2P51530 1060 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 C2orf54Q08AI8 447 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 UBXN2BQ14CS0 331 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 SIX1Q15475 284 aaPredicted RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 BOLA3Q53S33 107 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 BNIPLQ7Z465 357 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 MAATS1Q7Z4T9 603 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 LRRTM3Q86VH5 581 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 RNF168Q8IYW5 571 aaPredicted RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 DCP1BQ8IZD4 617 aaKnown RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 CELF5Q8N6W0 485 aaKnown RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 C12orf50Q8NA57 414 aaPredicted RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 ZMIZ2Q8NF64 920 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 OR10T2Q8NGX3 314 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 FAM71BQ8TC56 605 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 TEKT4Q8WW24 435 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.45□□□□□ -0.42
GGA3-217ENST00000583667 TBCBQ99426 244 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 LRRC1Q9BTT6 524 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 LRRC19Q9H756 370 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 LRRC4Q9HBW1 653 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 ARGLU1Q9NWB6 273 aaPredicted RBP12.45□□□□□ -0.42
GGA3-217ENST00000583667 MARCH5Q9NX47 278 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 PATJQ8NI35 1801 aa12.45□□□□□ -0.42
GGA3-217ENST00000583667 HELZ2Q9BYK8 2649 aaKnown RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 TSC2P49815 1807 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 TMEM8BA6NDV4 472 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 H7C4K7 107 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 CLDN5O00501 218 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 AP1G2O75843 785 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 BEST1O76090 585 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 TRUB2O95900 331 aaKnown RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 LAMP2P13473 410 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 DESP17661 470 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 CHRNA3P32297 505 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 NOS2P35228 1153 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 FLT3P36888 993 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 MATKP42679 507 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 MAGEA9P43362 315 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 CLCN4P51793 760 aa12.44□□□□□ -0.42
GGA3-217ENST00000583667 YWHAZP63104 245 aaKnown RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 KLF1Q13351 362 aaPredicted RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 ZNF211Q13398 564 aaPredicted RBP12.44□□□□□ -0.42
GGA3-217ENST00000583667 HTR4Q13639 388 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms