RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 DRGXA6NNA5 263 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 M0QYT0 321 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 PEX12O00623 359 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 CD3EAPO15446 510 aaKnown RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 CDC14BO60729 498 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 ERAL1O75616 437 aaKnown RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 BEST1O76090 585 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 ATXN1LP0C7T5 689 aaKnown RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 LAMP2P13473 410 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 EPHA8P29322 1005 aaPredicted RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 CD6P30203 668 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 LRPAP1P30533 357 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 PXNP49023 591 aaPredicted RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 GATMP50440 423 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 NLRP5P59047 1200 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 SLFN5Q08AF3 891 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 CAMK1Q14012 370 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 DCTN1Q14203 1278 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 CSHL1Q14406 222 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 PRICKLE4Q2TBC4 344 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 SPDYAQ5MJ70 313 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 CBWD5Q5RIA9 395 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 DGAT2L7PQ6IED9 249 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 KLHL24Q6TFL4 600 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 LAYNQ6UX15 382 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 RINLQ6ZS11 566 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 FAM47EQ6ZV65 393 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 IKBIPQ70UQ0 350 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 VSIG1Q86XK7 387 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 FUKQ8N0W3 1084 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 SPARTQ8N0X7 666 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 ADSSL1Q8N142 457 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 C11orf44Q8N8P7 122 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 PSD4Q8NDX1 1056 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 SUN3Q8TAQ9 357 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 METTL6Q8TCB7 284 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 SSH3Q8TE77 659 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 TRIB1Q96RU8 372 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 TTYH1Q9H313 450 aaPredicted RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 CXorf36Q9H7Y0 433 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 IL23AQ9NPF7 189 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 DIAPH3Q9NSV4 1193 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 LIN7CQ9NUP9 197 aaKnown RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 BAG5Q9UL15 447 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 CDYLQ9Y232 598 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 USP15Q9Y4E8 981 aaPredicted RBP5.33□□□□□ -1.56
SS18-223ENST00000583595 TESMINQ9Y4I5 508 aa5.33□□□□□ -1.56
SS18-223ENST00000583595 AGAP14A8MT82 685 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 MATN2O00339 956 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 TGFB1I1O43294 461 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 RAD17O75943 681 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 PGM3O95394 542 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 LARGE1O95461 756 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 SCGB1D1O95968 90 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 CLEC3BP05452 202 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 CSH1P0DML2 217 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 CSH2P0DML3 217 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 FCER1AP12319 257 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 UQCRC1P31930 480 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 GCLCP48506 637 aaPredicted RBP5.32□□□□□ -1.56
SS18-223ENST00000583595 CDK7P50613 346 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 PGDP52209 483 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 LRMPQ12912 555 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 CHAF1BQ13112 559 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 ACVR2BQ13705 512 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 NFYCQ13952 458 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 RASA2Q15283 850 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 TMEM196Q5HYL7 178 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 UBAP2Q5T6F2 1119 aaKnown RBP5.32□□□□□ -1.56
SS18-223ENST00000583595 LIPMQ5VYY2 423 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 TMEM108Q6UXF1 575 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 ZFPM1Q8IX07 1006 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 ZNF713Q8N859 430 aaPredicted RBP5.32□□□□□ -1.56
SS18-223ENST00000583595 ANKRD44Q8N8A2 993 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 FSIP1Q8NA03 581 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 CALML4Q96GE6 196 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 ADOQ96SZ5 270 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 NUDT22Q9BRQ3 303 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 TAOK3Q9H2K8 898 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 STN1Q9H668 368 aaKnown RBP5.32□□□□□ -1.56
SS18-223ENST00000583595 SYNCQ9H7C4 482 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 ZHX1Q9UKY1 873 aaPredicted RBP5.32□□□□□ -1.56
SS18-223ENST00000583595 SNX8Q9Y5X2 465 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 TOP2AP11388 1531 aaKnown RBP5.32□□□□□ -1.56
SS18-223ENST00000583595 CFTRP13569 1480 aa5.32□□□□□ -1.56
SS18-223ENST00000583595 DHX57Q6P158 1386 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 AGAP5A6NIR3 686 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 SAC3D1A6NKF1 404 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 SLC38A8A6NNN8 435 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 B5MCH6 92 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 VILLO15195 856 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 DHX16O60231 1041 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 CBFA2T3O75081 653 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 HEXIM1O94992 359 aaKnown RBP5.31□□□□□ -1.56
SS18-223ENST00000583595 HSPA4LO95757 839 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 FSHBP01225 129 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 TGFB3P10600 412 aa5.31□□□□□ -1.56
SS18-223ENST00000583595 C6P13671 934 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms