RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 COCHO43405 550 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SPOPO43791 374 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TBX10O75333 385 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GJA1P17302 382 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PFKLP17858 780 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RDXP35241 583 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CXCR3P49682 368 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ATXN1P54253 815 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CYP4F8P98187 520 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NHLH1Q02575 133 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DEUP1Q05D60 604 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NME3Q13232 169 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SLC5A9Q2M3M2 681 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TXNDC8Q6A555 127 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C16orf45Q96MC5 204 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ADAM7Q9H2U9 754 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 FAM204AQ9H8W3 233 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DDIT4Q9NX09 232 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MARCH2Q9P0N8 246 aa17.02■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ANAPC1Q9H1A4 1944 aa17.02■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SYNJ2BP-COX16A0A087WUM0 186 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 IRAK2O43187 625 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 OLFM2O95897 454 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TCF4P15884 667 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 HDCP19113 662 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 DDX6P26196 483 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CTNNA2P26232 953 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SSR1P43307 286 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ITIH3Q06033 890 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TEAD2Q15562 447 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 HADHQ16836 314 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 LRRC38Q5VT99 294 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SCYL2Q6P3W7 929 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SYT10Q6XYQ8 523 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC39A13Q96H72 371 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 HES6Q96HZ4 224 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SERPINB11Q96P15 392 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 APOL5Q9BWW9 433 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TLR10Q9BXR5 811 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC46A2Q9BY10 475 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PIGVQ9NUD9 493 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 COX16Q9P0S2 106 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PCSK1NQ9UHG2 260 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 DNAI1Q9UI46 699 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RASAL2Q9UJF2 1139 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PCDHA3Q9Y5H8 950 aa17.01■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC12A8A0AV02 714 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 FANCGO15287 622 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 DDX3YO15523 660 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TECTAO75443 2155 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TNNT1P13805 278 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 IL1R2P27930 398 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PEX5P50542 639 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KPNA1P52294 538 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC25A11Q02978 314 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 NNTQ13423 1086 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RPS6KA1Q15418 735 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TRIP4Q15650 581 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 BOLA3Q53S33 107 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ATAT1Q5SQI0 421 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RHOT1Q8IXI2 618 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ARL14EPQ8N8R7 260 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MAB21L3Q8N8X9 362 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MSLNLQ96KJ4 702 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC22A12Q96S37 553 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PEBP4Q96S96 227 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KLF16Q9BXK1 252 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TASP1Q9H6P5 420 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 WDCPQ9H6R7 721 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TRPC7Q9HCX4 862 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MUTYHQ9UIF7 546 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PACSIN2Q9UNF0 486 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TLR6Q9Y2C9 796 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MRPS23Q9Y3D9 190 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 HBS1LQ9Y450 684 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 DENND4CQ5VZ89 1909 aa17■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TRAV19A0A0A6YYK7 116 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KCNU1A8MYU2 1149 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MIF4GDA9UHW6 222 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ENC1O14682 589 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MSI1O43347 362 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PSTPIP1O43586 416 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PRPSAP2O60256 369 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ATP1A1P05023 1023 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CASQ1P31415 396 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CTNNA1P35221 906 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ADRA1BP35368 520 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TBX4P57082 545 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC7A9P82251 487 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 COG7P83436 770 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PPP2R5DQ14738 602 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ATP13A4Q4VNC1 1196 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ARHGAP15Q53QZ3 475 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms