RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 BOLA3Q53S33 107 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 CC2D1AQ6P1N0 951 aaPredicted RBP14.86□□□□□ -0.03
SKA2-205ENST00000580541 SCYL2Q6P3W7 929 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 DAAM2Q86T65 1068 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 TAC4Q86UU9 113 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 AZIN2Q96A70 460 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 TBC1D14Q9P2M4 693 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 EPS15L1Q9UBC2 864 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.86□□□□□ -0.03
SKA2-205ENST00000580541 DUSP10Q9Y6W6 482 aa14.86□□□□□ -0.03
SKA2-205ENST00000580541 OBSL1O75147 1896 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 SYNJ2BP-COX16A0A087WUM0 186 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 E2F8A0AVK6 867 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 BUB1O43683 1085 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 KIF5CO60282 957 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 LATS1O95835 1130 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 SSR1P43307 286 aaKnown RBP14.85□□□□□ -0.03
SKA2-205ENST00000580541 CXCR3P49682 368 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
SKA2-205ENST00000580541 ODF2Q5BJF6 829 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 STXBP5Q5T5C0 1151 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 C11orf63Q6NUN7 778 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 PSTKQ8IV42 348 aaKnown RBP14.85□□□□□ -0.03
SKA2-205ENST00000580541 YAF2Q8IY57 180 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 CCAR2Q8N163 923 aaKnown RBP14.85□□□□□ -0.03
SKA2-205ENST00000580541 TRIM58Q8NG06 486 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 TPCN2Q8NHX9 752 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 ADAM32Q8TC27 787 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 ATXN2LQ8WWM7 1075 aaKnown RBP14.85□□□□□ -0.03
SKA2-205ENST00000580541 ELSPBP1Q96BH3 223 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 OTUB2Q96DC9 234 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 BTN2A3PQ96KV6 586 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 ZSWIM3Q96MP5 696 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 SLC22A12Q96S37 553 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 MYADMQ96S97 322 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 KCND1Q9NSA2 647 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 SMPD4Q9NXE4 827 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 COX16Q9P0S2 106 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 PRKAG3Q9UGI9 489 aa14.85□□□□□ -0.03
SKA2-205ENST00000580541 TMEM110-MUSTN1A8MSY1 372 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 LEFTY2O00292 366 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 MDM4O15151 490 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 SPOPO43791 374 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 KRT7P08729 469 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 CHKAP35790 457 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 EIF4EBP2Q13542 120 aaPredicted RBP14.84□□□□□ -0.03
SKA2-205ENST00000580541 TRNP1Q6NT89 227 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 HTR3DQ70Z44 454 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 BNIPLQ7Z465 357 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 SLFN11Q7Z7L1 901 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 ZDHHC14Q8IZN3 488 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 BPIFB1Q8TDL5 484 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 SH3RF2Q8TEC5 729 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 DEPDC1BQ8WUY9 529 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 USP13Q92995 863 aaPredicted RBP14.84□□□□□ -0.03
SKA2-205ENST00000580541 SLC39A13Q96H72 371 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 HAPLN3Q96S86 360 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 IRX2Q9BZI1 471 aaPredicted RBP14.84□□□□□ -0.03
SKA2-205ENST00000580541 GKN1Q9NS71 199 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 TRMT1Q9NXH9 659 aaKnown RBP14.84□□□□□ -0.03
SKA2-205ENST00000580541 CFAP97Q9P2B7 532 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 IGSF9Q9P2J2 1179 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 TFR2Q9UP52 801 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 ALG6Q9Y672 507 aa14.84□□□□□ -0.03
SKA2-205ENST00000580541 KCNU1A8MYU2 1149 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 BUB1BO60566 1050 aaPredicted RBP14.83□□□□□ -0.04
SKA2-205ENST00000580541 ECI2O75521 394 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 STC2O76061 302 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 IGLV3-27P01718 113 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 HMBSP08397 361 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 ADRA1BP35368 520 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 ZNF135P52742 658 aaPredicted RBP14.83□□□□□ -0.04
SKA2-205ENST00000580541 HDAC4P56524 1084 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 OGDHQ02218 1023 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 ZC3H12AQ5D1E8 599 aaKnown RBP14.83□□□□□ -0.04
SKA2-205ENST00000580541 EFHC2Q5JST6 749 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 ERMARDQ5T6L9 678 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 LRRC38Q5VT99 294 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 MFSD6LQ8IWD5 586 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 NTAN1Q96AB6 310 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 BTBD6Q96KE9 485 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 RPGRIP1Q96KN7 1286 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 FCRL2Q96LA5 508 aaPredicted RBP14.83□□□□□ -0.04
SKA2-205ENST00000580541 C1orf74Q96LT6 269 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 TRIM7Q9C029 511 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 TKTL2Q9H0I9 626 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 PIGVQ9NUD9 493 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 ARHGEF38Q9NXL2 777 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 CDH22Q9UJ99 828 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 AMFRQ9UKV5 643 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 PYCARDQ9ULZ3 195 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 USP18Q9UMW8 372 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 ZKSCAN5Q9Y2L8 839 aa14.83□□□□□ -0.04
SKA2-205ENST00000580541 HEPACAM2A8MVW5 462 aa14.82□□□□□ -0.04
SKA2-205ENST00000580541 MSI1O43347 362 aaKnown RBP14.82□□□□□ -0.04
SKA2-205ENST00000580541 LRCH4O75427 683 aa14.82□□□□□ -0.04
SKA2-205ENST00000580541 MOCS3O95396 460 aa14.82□□□□□ -0.04
SKA2-205ENST00000580541 IRF1P10914 325 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms