RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 HMBSP08397 361 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 NCAM1P13591 858 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 CORO1AP31146 461 aaKnown RBP18.77■□□□□ 0.6
MKS1-209ENST00000580127 DNM1Q05193 864 aaKnown RBP18.77■□□□□ 0.6
MKS1-209ENST00000580127 FUT11Q495W5 492 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 KRT39Q6A163 491 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 ANKS1BQ7Z6G8 1248 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 SCD5Q86SK9 330 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 TWNKQ96RR1 684 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 GPR174Q9BXC1 333 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 MIR1-1HGQ9H1L0 117 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 TMEM8AQ9HCN3 771 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 OLA1Q9NTK5 396 aaKnown RBP18.77■□□□□ 0.6
MKS1-209ENST00000580127 ELOVL2Q9NXB9 296 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 PLA2G4CQ9UP65 541 aa18.77■□□□□ 0.6
MKS1-209ENST00000580127 A0A1B0GVL5 298 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 CER1O95813 267 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 KLKB1P03952 638 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 MAOBP27338 520 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 HARS2P49590 506 aaKnown RBP18.76■□□□□ 0.59
MKS1-209ENST00000580127 MFAP3P55082 362 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 ZNF445P59923 1031 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 SUZ12Q15022 739 aaKnown RBP18.76■□□□□ 0.59
MKS1-209ENST00000580127 ZNF394Q53GI3 561 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 C1orf220Q5T0J3 134 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 PPP1R26Q5T8A7 1209 aaPredicted RBP18.76■□□□□ 0.59
MKS1-209ENST00000580127 RAB44Q7Z6P3 723 aaPredicted RBP18.76■□□□□ 0.59
MKS1-209ENST00000580127 DENND1CQ8IV53 801 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 NAXDQ8IW45 347 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 CPXM2Q8N436 756 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 TAS1R2Q8TE23 839 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 TMEM176AQ96HP8 235 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 CIPCQ9C0C6 399 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 PCED1AQ9H1Q7 454 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 SLC6A17Q9H1V8 727 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 MMRN2Q9H8L6 949 aa18.76■□□□□ 0.59
MKS1-209ENST00000580127 USP36Q9P275 1121 aaKnown RBP18.76■□□□□ 0.59
MKS1-209ENST00000580127 RALYQ9UKM9 306 aaKnown RBP18.76■□□□□ 0.59
MKS1-209ENST00000580127 METTL12A8MUP2 240 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 BCAT2O15382 392 aaPredicted RBP18.75■□□□□ 0.59
MKS1-209ENST00000580127 RHOBTB3O94955 611 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 PFKFB1P16118 471 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 SYKP43405 635 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 TPMTP51580 245 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 FYB2Q5VWT5 728 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 LRSAM1Q6UWE0 723 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 SERPINA13PQ6UXR4 307 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 OR2I1PQ8NGU4 316 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 SETD7Q8WTS6 366 aaKnown RBP18.75■□□□□ 0.59
MKS1-209ENST00000580127 PLD4Q96BZ4 506 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 SPATA32Q96LK8 384 aa18.75■□□□□ 0.59
MKS1-209ENST00000580127 APOBEC3GQ9HC16 384 aaKnown RBP18.75■□□□□ 0.59
MKS1-209ENST00000580127 AGO1Q9UL18 857 aaKnown RBP18.75■□□□□ 0.59
MKS1-209ENST00000580127 SLC12A8A0AV02 714 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 EPHX1P07099 455 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 ZNF883P0CG24 379 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 TRIM49P0CI25 452 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 TRIM49CP0CI26 452 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 YWHAGP61981 247 aaKnown RBP eCLIP18.74■□□□□ 0.59
MKS1-209ENST00000580127 FAM193AP78312 1265 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 PPP3CAQ08209 521 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 GRIK2Q13002 908 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 ENPP2Q13822 863 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 GEN1Q17RS7 908 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 MPPE1Q53F39 396 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 GUF1Q8N442 669 aaKnown RBP18.74■□□□□ 0.59
MKS1-209ENST00000580127 ANKRD52Q8NB46 1076 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 FBXL13Q8NEE6 735 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 RNF139Q8WU17 664 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 ADAMTS14Q8WXS8 1223 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 PIWIL1Q96J94 861 aaKnown RBP18.74■□□□□ 0.59
MKS1-209ENST00000580127 CDC6Q99741 560 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 MKRN2Q9H000 416 aaKnown RBP18.74■□□□□ 0.59
MKS1-209ENST00000580127 HESX1Q9UBX0 185 aa18.74■□□□□ 0.59
MKS1-209ENST00000580127 PCDH15Q96QU1 1955 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 ATRXP46100 2492 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 GJB3O75712 270 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 ZBED1O96006 694 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 FTH1P19P0C7X4 201 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 MATKP42679 507 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 IL12RB1P42701 662 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 TKTL1P51854 596 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 YWHAEP62258 255 aaKnown RBP18.73■□□□□ 0.59
MKS1-209ENST00000580127 KRT85P78386 507 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 PDE4CQ08493 712 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 ZNF234Q14588 700 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 TEAD4Q15561 434 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 DCAF12L1Q5VU92 463 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 IPO9Q96P70 1041 aaKnown RBP18.73■□□□□ 0.59
MKS1-209ENST00000580127 GAREM1Q9H706 876 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 LRRC4Q9HBW1 653 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 CISHQ9NSE2 258 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 RAB20Q9NX57 234 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 KIAA1522Q9P206 1035 aaPredicted RBP18.73■□□□□ 0.59
MKS1-209ENST00000580127 LHX6Q9UPM6 363 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
MKS1-209ENST00000580127 CETN3O15182 167 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 IGLV3-19P01714 112 aa18.72■□□□□ 0.59
MKS1-209ENST00000580127 EPB41P11171 864 aaKnown RBP18.72■□□□□ 0.59
MKS1-209ENST00000580127 ARHGAP17Q68EM7 881 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms