RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NMUR2Q9GZQ4 415 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 MAF1Q9H063 256 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 DTLQ9NZJ0 730 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 TRIP11Q15643 1979 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CREB3O43889 395 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 RFPL1O75677 317 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 BEST1O76090 585 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 HAUS5O94927 633 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 DLDP09622 509 aaKnown RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 VAV1P15498 845 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ABCG1P45844 678 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SOX4Q06945 474 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 BST1Q10588 318 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 NME3Q13232 169 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 PRKD1Q15139 912 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SLC5A9Q2M3M2 681 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ZNF792Q3KQV3 632 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 DCAF6Q58WW2 860 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SLC45A4Q5BKX6 768 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ANKRD20A2Q5SQ80 823 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ANKRD20A1Q5TYW2 823 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 ANKRD20A3Q5VUR7 823 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SLC9A4Q6AI14 798 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 FASTKD5Q7L8L6 764 aaKnown RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CCNYQ8ND76 341 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 SLC10A4Q96EP9 437 aa10.85□□□□□ -0.67
TOP3A-209ENST00000580095 RAB3IPQ96QF0 476 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 CADM1Q9BY67 442 aaKnown RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 PIN4Q9Y237 131 aaKnown RBP10.85□□□□□ -0.67
TOP3A-209ENST00000580095 BPTFQ12830 3046 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 PEX11AO75192 247 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 USP12O75317 370 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 SNRPAP09012 282 aaKnown RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 GNL1P36915 607 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 GRM5P41594 1212 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 AP1B1Q10567 949 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 RCN2Q14257 317 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 PDK2Q15119 407 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 HSF5Q4G112 596 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 TTC39BQ5VTQ0 682 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 C9orf57Q5W0N0 161 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 RINLQ6ZS11 566 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 APBB1IPQ7Z5R6 666 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 OR6J1Q8NGC5 347 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 KBTBD7Q8WVZ9 684 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 DNAJB3Q8WWF6 145 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 PSAT1Q9Y617 370 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 KCNK1O00180 336 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 KRT37O76014 449 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 APOEP02649 317 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 DHRS4L1P0CG22 281 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 SKIV2L2P42285 1042 aaKnown RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 SLC18A2Q05940 514 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 DTX3LQ8TDB6 740 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 DEPDC1BQ8WUY9 529 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 SNX27Q96L92 541 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 SIGLEC10Q96LC7 697 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 AGAP3Q96P47 875 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 PPCSQ9HAB8 311 aa10.84□□□□□ -0.67
TOP3A-209ENST00000580095 SPATS2LQ9NUQ6 558 aaKnown RBP10.84□□□□□ -0.67
TOP3A-209ENST00000580095 CCDC78A2IDD5 438 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 NDC80O14777 642 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 MFSD11O43934 449 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 LYPLA1O75608 230 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 MMP3P08254 477 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 TGM2P21980 687 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 PGGT1BP53609 377 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 ADIGQ0VDE8 80 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 KHDC1Q4VXA5 237 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 HEATR6Q6AI08 1181 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 HACE1Q8IYU2 909 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 DEFB106AQ8N104 65 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 NME8Q8N427 588 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 ZFP42Q96MM3 310 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 SSU72Q9NP77 194 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 ACSS2Q9NR19 701 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 FETUBQ9UGM5 382 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 PLLPQ9Y342 182 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 TIMM13Q9Y5L4 95 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 OTOFQ9HC10 1997 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 MEIS3P2A8K0S8 358 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 BTBD19C9JJ37 291 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 FCHO1O14526 889 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 SNUPNO95149 360 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 AMHP03971 560 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 ENO1P06733 434 aaKnown RBP10.83□□□□□ -0.68
TOP3A-209ENST00000580095 KDSRQ06136 332 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 SNAPC2Q13487 334 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 PPM1JQ5JR12 505 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 SYPL2Q5VXT5 272 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 NCBP2-AS2Q69YL0 99 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 SLC27A1Q6PCB7 646 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 HFE2Q6ZVN8 426 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 USP6NLQ92738 828 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 KATNBL1Q9H079 304 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 ADAMTS10Q9H324 1103 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms