RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ORC1Q13415 861 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 ADAM9Q13443 819 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 EDRF1Q3B7T1 1238 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 KIAA1211LQ6NV74 962 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
TRAF4-214ENST00000580073 Q6ZNB5 142 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 RSRC2Q7L4I2 434 aaKnown RBP14.03□□□□□ -0.16
TRAF4-214ENST00000580073 METTL3Q86U44 580 aaKnown RBP14.03□□□□□ -0.16
TRAF4-214ENST00000580073 C12orf29Q8N999 325 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 ZNF419Q96HQ0 510 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-214ENST00000580073 TMEM121BQ9BXQ6 578 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-214ENST00000580073 RASAL2Q9UJF2 1139 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 TMEM131Q92545 1883 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 PTPRBP23467 1997 aa14.03□□□□□ -0.16
TRAF4-214ENST00000580073 MUC22E2RYF6 1773 aaPredicted RBP14.02□□□□□ -0.16
TRAF4-214ENST00000580073 A0A1B0GTW7 788 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 HYAL3O43820 417 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-214ENST00000580073 CILPO75339 1184 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 STC2O76061 302 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 CER1O95813 267 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 ACADMP11310 421 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 GTF2H1P32780 548 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 MCCD1P59942 119 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-214ENST00000580073 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 SPOPLQ6IQ16 392 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 IL27RAQ6UWB1 636 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 GPRIN1Q7Z2K8 1008 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 MIB1Q86YT6 1006 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 FAM186BQ8IYM0 893 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 CADM4Q8NFZ8 388 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 MRGPRX1Q96LB2 322 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 DUSP16Q9BY84 665 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 PRDM16Q9HAZ2 1276 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 TMEM8AQ9HCN3 771 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 OLA1Q9NTK5 396 aaKnown RBP14.02□□□□□ -0.17
TRAF4-214ENST00000580073 CACNA2D2Q9NY47 1150 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 STON1Q9Y6Q2 735 aa14.02□□□□□ -0.17
TRAF4-214ENST00000580073 SPAARA0A1B0GVQ0 90 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 PRRT4C9JH25 899 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 HHLA1C9JL84 531 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 GREM1O60565 184 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 TBX18O95935 607 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 PENKP01210 267 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 CD58P19256 250 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 SPINK2P20155 84 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 CORO1AP31146 461 aaKnown RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 PSMC2P35998 433 aaKnown RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 KRT39Q6A163 491 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 C11orf57Q6ZUT1 292 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 TOGARAM2Q6ZUX3 1019 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 SLC41A1Q8IVJ1 513 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 CPXM2Q8N436 756 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 PRCCQ92733 491 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 BHMTQ93088 406 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 PLD4Q96BZ4 506 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 ACOX2Q99424 681 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 SLC2A11Q9BYW1 496 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 GTPBP4Q9BZE4 634 aaKnown RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 PCED1AQ9H1Q7 454 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 FBRSQ9HAH7 460 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 USP36Q9P275 1121 aaKnown RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 FBXO10Q9UK96 956 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 APOBEC2Q9Y235 224 aaKnown RBP14.01□□□□□ -0.17
TRAF4-214ENST00000580073 RAD54BQ9Y620 910 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 ZFHX4Q86UP3 3567 aa14.01□□□□□ -0.17
TRAF4-214ENST00000580073 FRYQ5TBA9 3013 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 PSMA7O14818 248 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 TRIM24O15164 1050 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 ZNF883P0CG24 379 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 NCAM1P13591 858 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 MFAP3P55082 362 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 YWHAEP62258 255 aaKnown RBP14□□□□□ -0.17
TRAF4-214ENST00000580073 LRRC63Q05C16 580 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 GRIK2Q13002 908 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 PAK1Q13153 545 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 IRF2BP1Q8IU81 584 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 NAXDQ8IW45 347 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 DEFB119Q8N690 84 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 ZNF557Q8N988 423 aaPredicted RBP14□□□□□ -0.17
TRAF4-214ENST00000580073 MLKLQ8NB16 471 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 WBP2Q969T9 261 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 ELMO3Q96BJ8 720 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 SIPA1Q96FS4 1042 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 HEXIM2Q96MH2 286 aaKnown RBP14□□□□□ -0.17
TRAF4-214ENST00000580073 TWNKQ96RR1 684 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 FUCA2Q9BTY2 467 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 UBXN6Q9BZV1 441 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 MMRN2Q9H8L6 949 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 NMUR1Q9HB89 426 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 CD248Q9HCU0 757 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 OSER1Q9NX31 292 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 PLK2Q9NYY3 685 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 THAP10Q9P2Z0 257 aaPredicted RBP14□□□□□ -0.17
TRAF4-214ENST00000580073 USP3Q9Y6I4 520 aa14□□□□□ -0.17
TRAF4-214ENST00000580073 CHD6Q8TD26 2715 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 IGF2RP11717 2491 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FAM221BA6H8Z2 402 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 SRRM3A6NNA2 597 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms