RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SMOQ99835 787 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SLC2A11Q9BYW1 496 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TNMDQ9H2S6 317 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ELOVL2Q9NXB9 296 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FTSJ1Q9UET6 329 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 BTBD3Q9Y2F9 522 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PCDHGA1Q9Y5H4 931 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 MORC2Q9Y6X9 1032 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 UBE4BO95155 1302 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 STC2O76061 302 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 C1SP09871 688 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 C7P10643 843 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 RALAP11233 206 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 RARGP13631 454 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PDCP20941 246 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CYP2J2P51589 502 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ZNF234Q14588 700 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 GEN1Q17RS7 908 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 FYB2Q5VWT5 728 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 SERPINA13PQ6UXR4 307 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 EPM2AIP1Q7L775 607 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ZNF605Q86T29 641 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ACOT1Q86TX2 421 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 OR2T3Q8NH03 318 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PIP4K2CQ8TBX8 421 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PIWIL1Q96J94 861 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CLIC6Q96NY7 704 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CUEDC2Q9H467 287 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 SNX11Q9Y5W9 270 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PTPN13Q12923 2485 aa12.83□□□□□ -0.36
CDK5RAP3-216ENST00000579853 FAM149AA5PLN7 773 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CYP26A1O43174 497 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TGFB1I1O43294 461 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 STX6O43752 255 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CCDC130P13994 396 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 JUPP14923 745 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CD27P26842 260 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 HOXD13P35453 343 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PGFP49763 221 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 BCAT1P54687 386 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PDE4CQ08493 712 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 NCOA4Q13772 614 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 FAM26FQ5R3K3 315 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 DHRS13Q6UX07 377 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 C12orf56Q8IXR9 622 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 BAP1Q92560 729 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 ZNF516Q92618 1163 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TAF4BQ92750 862 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CRELD1Q96HD1 420 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 LHX5Q9H2C1 402 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PRORYQ9H606 182 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TM9SF3Q9HD45 589 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CLIC5Q9NZA1 410 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PLA2G4CQ9UP65 541 aa12.82□□□□□ -0.36
CDK5RAP3-216ENST00000579853 A0A1W2PQH9 124 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PLK4O00444 970 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CLIC2O15247 247 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 EXOC3O60645 756 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 BEST1O76090 585 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 RPN1P04843 607 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 EIF2S3P41091 472 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 NDST1P52848 882 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CAMK2GQ13555 558 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 SGSM1Q2NKQ1 1148 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TTC31Q49AM3 519 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CNNM4Q6P4Q7 775 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 SCARA5Q6ZMJ2 495 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CLEC20AQ6ZU45 233 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 FAM124AQ86V42 546 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 MARCH9Q86YJ5 346 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 CPXM2Q8N436 756 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 PDILTQ8N807 584 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 GOLGA5Q8TBA6 731 aa12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 HNRNPABQ99729 332 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 C6orf106Q9H6K1 298 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TMEM131Q92545 1883 aa12.8□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TEX51A0A1B0GUA7 166 aa12.8□□□□□ -0.36
CDK5RAP3-216ENST00000579853 VPS37CA5D8V6 355 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-216ENST00000579853 YKT6O15498 198 aa12.8□□□□□ -0.36
CDK5RAP3-216ENST00000579853 TSPAN3O60637 253 aa12.8□□□□□ -0.36
CDK5RAP3-216ENST00000579853 SEMA4FO95754 770 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms