RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-208	ENST00000578630	GJA4	P35212	333 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADK	P55263	362 aa	Known RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	GSC	P56915	257 aa	Predicted RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	GRSF1	Q12849	480 aa	Known RBP eCLIP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	PTP4A2	Q12974	167 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	TBX2	Q13207	712 aa	Predicted RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	UBXN2B	Q14CS0	331 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	ANO4	Q32M45	955 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	SLC25A52	Q3SY17	297 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	LY6G5C	Q5SRR4	150 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	IER5L	Q5T953	404 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	HGSNAT	Q68CP4	663 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	ASTL	Q6HA08	431 aa	Predicted RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	DNAJC24	Q6P3W2	148 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630		Q6ZNB5	142 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	NUDT18	Q6ZVK8	323 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	PHLDB2	Q86SQ0	1253 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	FBXL6	Q8N531	539 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	ATP6V0D2	Q8N8Y2	350 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	C3orf20	Q8ND61	904 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADAM32	Q8TC27	787 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	WBP2	Q969T9	261 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	TRIM11	Q96F44	468 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	PIWIL1	Q96J94	861 aa	Known RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	XPO6	Q96QU8	1125 aa	Known RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	DNAJC7	Q99615	494 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	DDX23	Q9BUQ8	820 aa	Known RBP	12	□□□□□ -0.49
ERBB2-208	ENST00000578630	PARVA	Q9NVD7	372 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	DDIT4	Q9NX09	232 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	TMEM59L	Q9UK28	342 aa		12	□□□□□ -0.49
ERBB2-208	ENST00000578630	F5	P12259	2224 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	SSU72P8	A0A1W2PR75	194 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	FAM86C2P	A6NEL3	165 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	OTOL1	A6NHN0	477 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	IRAK2	O43187	625 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ACSL4	O60488	711 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	MFAP3L	O75121	409 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	IGLV3-27	P01718	113 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	MYBL1	P10243	752 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADH5	P11766	374 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	PDGFRA	P16234	1089 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CD72	P21854	359 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	SDC4	P31431	198 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	SOX9	P48436	509 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	GALK1	P51570	392 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	NME3	Q13232	169 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ARID5B	Q14865	1188 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	MPPE1	Q53F39	396 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CCDC122	Q5T0U0	273 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADGRF1	Q5T601	910 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	DCUN1D2	Q6PH85	259 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	TPGS1	Q6ZTW0	290 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	MON1B	Q7L1V2	547 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	TAC4	Q86UU9	113 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	TMEM25	Q86YD3	366 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CPXM2	Q8N436	756 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CCDC26	Q8TAB7	109 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CD101	Q93033	1021 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	TMA16	Q96EY4	203 aa	Known RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	SLC39A13	Q96H72	371 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CCDC42	Q96M95	316 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	NPY6R	Q99463	290 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	IRX2	Q9BZI1	471 aa	Predicted RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ISCU	Q9H1K1	167 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	WDCP	Q9H6R7	721 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	MRPL47	Q9HD33	250 aa	Known RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	LTB4R2	Q9NPC1	389 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	METTL5	Q9NRN9	209 aa	Known RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ABHD10	Q9NUJ1	306 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	TAS2R14	Q9NYV8	317 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	COX16	Q9P0S2	106 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	ARHGAP20	Q9P2F6	1191 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	NDRG2	Q9UN36	371 aa	Known RBP	11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	OBSL1	O75147	1896 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	TECTA	O75443	2155 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	CUL9	Q8IWT3	2517 aa		11.99	□□□□□ -0.49
ERBB2-208	ENST00000578630	GOLGA6L6	A8MZA4	724 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	TRDMT1	O14717	391 aa	Known RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	AKR1B10	O60218	316 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	ADCY5	O95622	1261 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	PDGFB	P01127	241 aa	Predicted RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	IGLV3-25	P01717	112 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	CYP17A1	P05093	508 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	PLEK	P08567	350 aa	Predicted RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	AOC1	P19801	751 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	DRD1	P21728	446 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	RRM1	P23921	792 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	EIF4A3	P38919	411 aa	Known RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	EIF2D	P41214	584 aa	Known RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	MAGEA9	P43362	315 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	SULT1E1	P49888	294 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	DEUP1	Q05D60	604 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	LRRC32	Q14392	662 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	PPP2R5D	Q14738	602 aa		11.98	□□□□□ -0.49
ERBB2-208	ENST00000578630	PON2	Q15165	354 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms