RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 DDNO94850 711 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 PGM3O95394 542 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 SLC25A27O95847 323 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 CLPTM1O96005 669 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 TSPAN8P19075 237 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 FGFR3P22607 806 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 JAM2P57087 298 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 INPP5AQ14642 412 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 GALNTL6Q49A17 601 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 WASHC2DQ5SRD0 308 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 OR52K1Q8NGK4 314 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 GDPD5Q8WTR4 605 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 HPS4Q9NQG7 708 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 ARL8BQ9NVJ2 186 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 PDP2Q9P2J9 529 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 MYO1GB0I1T2 1018 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 USP1O94782 785 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 PSMG1O95456 288 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 PTPN20Q4JDL3 420 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 MIER2Q8N344 545 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 SNRNP25Q9BV90 132 aaKnown RBP12.37□□□□□ -0.43
ERBB2-206ENST00000578373 THAP1Q9NVV9 213 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 RBM22Q9NW64 420 aaKnown RBP eCLIP12.37□□□□□ -0.433e-6■■□□□ 14
ERBB2-206ENST00000578373 STARD13Q9Y3M8 1113 aa12.37□□□□□ -0.43
ERBB2-206ENST00000578373 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TPP1O14773 563 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TADA2AO75478 443 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 RHOBTB1O94844 696 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 PSMB4P28070 264 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 PCSK1P29120 753 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 SERPINB8P50452 374 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 PEX5P50542 639 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 NRF1Q16656 503 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 C10orf120Q5SQS8 335 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 DCAF12L1Q5VU92 463 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 CMC1Q7Z7K0 106 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 FAM13CQ8NE31 585 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 OMDQ99983 421 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ETNK2Q9NVF9 386 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 SIGLEC16A6NMB1 481 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 NR5A2O00482 541 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ZNF862O60290 1169 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 EDF1O60869 148 aaKnown RBP12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ETS2P15036 469 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 CHRNB2P17787 502 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ARHGDIAP52565 204 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TAF5Q15542 800 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ZRANB3Q5FWF4 1079 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TATDN1Q6P1N9 297 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 DCUN1D5Q9BTE7 237 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 COPS7BQ9H9Q2 264 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-206ENST00000578373 NT5MQ9NPB1 228 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 NR2E3Q9Y5X4 410 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 C2CD2LO14523 706 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 SERPINE1P05121 402 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 GP5P40197 560 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 DCCP43146 1447 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 YWHAZP63104 245 aaKnown RBP12.36□□□□□ -0.43
ERBB2-206ENST00000578373 C15orf52Q6ZUT6 534 aaKnown RBP12.36□□□□□ -0.43
ERBB2-206ENST00000578373 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 MON2Q7Z3U7 1717 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ANKRD13AQ8IZ07 590 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 CATSPER1Q8NEC5 780 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 KLHL4Q9C0H6 718 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TRIM13O60858 407 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 BAIAP3O94812 1187 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 POMCP01189 267 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 USP4Q13107 963 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TMEM132BQ14DG7 1078 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 ZDHHC24Q6UX98 284 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 MOB2Q70IA6 237 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 DAW1Q8N136 415 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 CERKQ8TCT0 537 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 CPXM1Q96SM3 734 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 NMUR2Q9GZQ4 415 aa12.36□□□□□ -0.43
ERBB2-206ENST00000578373 TIMM44O43615 452 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PIGNO95427 931 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 PTPRAP18433 802 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 GRK2P25098 689 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 XRCC4Q13426 336 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 SAMD3Q8N6K7 520 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 DACH2Q96NX9 599 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 SEPHS2Q99611 448 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ZNF184Q99676 751 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-206ENST00000578373 TMEM191CA6NGB0 347 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 CFHP08603 1231 aa12.35□□□□□ -0.43
ERBB2-206ENST00000578373 ZNF23P17027 643 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms