RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 NPC1O15118 1278 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 HMBSP08397 361 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 PRCPP42785 496 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 METTL3Q86U44 580 aaKnown RBP13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 TRIML1Q8N9V2 468 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 FBXL13Q8NEE6 735 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 ZNF419Q96HQ0 510 aaPredicted RBP13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 SLC6A17Q9H1V8 727 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 CISHQ9NSE2 258 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
SMARCD2-207ENST00000578234 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 STX10O60499 249 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 SYPP08247 313 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 RAD23BP54727 409 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 MFAP3P55082 362 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 ENPP2Q13822 863 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 E2F5Q15329 346 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 RAB41Q5JT25 222 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 SYCP2LQ5T4T6 812 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 FYB2Q5VWT5 728 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 ARHGAP17Q68EM7 881 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 PIGZQ86VD9 579 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 MINDY1Q8N5J2 469 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 KDF1Q8NAX2 398 aaPredicted RBP13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 ANKRD52Q8NB46 1076 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 SLC4A11Q8NBS3 891 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 SEMA4DQ92854 862 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 FOXJ1Q92949 421 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 P2RY11Q96G91 374 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 TMEM176AQ96HP8 235 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 MIR1-1HGQ9H1L0 117 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 STON1Q9Y6Q2 735 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
SMARCD2-207ENST00000578234 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 TMEM8BA6NDV4 472 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 MEI4A8MW99 385 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 BMP6P22004 513 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 MAOBP27338 520 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 CORO1AP31146 461 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 MXI1P50539 228 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 SLC8A3P57103 927 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 EFEMP1Q12805 493 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 SLC14A1Q13336 389 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 MORC3Q14149 939 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 STARD3Q14849 445 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 GEN1Q17RS7 908 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 FUT11Q495W5 492 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 CHCHD4Q8N4Q1 142 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 SLC2A11Q9BYW1 496 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 ITM2CQ9NQX7 267 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 MARCH2Q9P0N8 246 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 SUSD2Q9UGT4 822 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 RASAL2Q9UJF2 1139 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 KLK13Q9UKR3 277 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 AGO1Q9UL18 857 aaKnown RBP13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 STRIP2Q9ULQ0 834 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 IGF2RP11717 2491 aa13.16□□□□□ -0.3
SMARCD2-207ENST00000578234 FAM208BQ5VWN6 2430 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CETN3O15182 167 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 MBD3O95983 291 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CYBBP04839 570 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 GNSP15586 552 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CD6P30203 668 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 TKTL1P51854 596 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 ARID5AQ03989 594 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 HNRNPDQ14103 355 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 EIF4HQ15056 248 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 WDR45BQ5MNZ6 344 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 RSRC2Q7L4I2 434 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 FAM217AQ8IXS0 508 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CADM4Q8NFZ8 388 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 SETD7Q8WTS6 366 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 GATA6Q92908 595 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 PIWIL1Q96J94 861 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 ARID3AQ99856 593 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms