RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 COL5A1P20908 1838 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 MYOFQ9NZM1 2061 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ANTXRLA6NF34 631 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 F13A1P00488 732 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ACADMP11310 421 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ADORA2BP29275 332 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 PSMC2P35998 433 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 CAMK2GQ13555 558 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 MPP7Q5T2T1 576 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 PM20D1Q6GTS8 502 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 TMPRSS7Q7RTY8 843 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 KDM1BQ8NB78 822 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 SIPA1Q96FS4 1042 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 TOE1Q96GM8 510 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ACOX2Q99424 681 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 BLZF1Q9H2G9 400 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 ELOVL2Q9NXB9 296 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 KIAA1257Q9ULG3 409 aa11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-214ENST00000578112 BCAT2O15382 392 aaPredicted RBP11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 YKT6O15498 198 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 RHOBTB3O94955 611 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 CLSTN1O94985 981 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 CMA1P23946 247 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 MYH10P35580 1976 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 GRIA4P48058 902 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 ME1P48163 572 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 STK4Q13043 487 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 EDRF1Q3B7T1 1238 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 C1orf220Q5T0J3 134 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 DCAF12L1Q5VU92 463 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 KRT39Q6A163 491 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 TPGS1Q6ZTW0 290 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 GUF1Q8N442 669 aaKnown RBP11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 AZIN2Q96A70 460 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 CCDC34Q96HJ3 373 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 LHX5Q9H2C1 402 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 CCDC86Q9H6F5 360 aaKnown RBP11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 SGK2Q9HBY8 427 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 CACNA2D2Q9NY47 1150 aa11.77□□□□□ -0.52
SMARCE1-214ENST00000578112 ADAMTS9Q9P2N4 1935 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 TOP3BO95985 862 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 SPINK2P20155 84 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 TPMTP51580 245 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 GPRIN1Q7Z2K8 1008 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 ANKRD52Q8NB46 1076 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 ARID3AQ99856 593 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 HMGXB4Q9UGU5 601 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 SUN2Q9UH99 717 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 RASAL2Q9UJF2 1139 aa11.77□□□□□ -0.53
SMARCE1-214ENST00000578112 SCAMP3O14828 347 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 IRAK2O43187 625 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 SH3BP5O60239 455 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 PCDHGA12O60330 932 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 CORO1AP31146 461 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 IL12RB1P42701 662 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 WASP42768 502 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 AFMP43652 599 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 COPAP53621 1224 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 DLG4P78352 724 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 CHCHD4Q8N4Q1 142 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 MARCH2Q9P0N8 246 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 SERTAD1Q9UHV2 236 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 AGO1Q9UL18 857 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 HPSEQ9Y251 543 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 USP24Q9UPU5 2620 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 XPO1O14980 1071 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 TBX18O95935 607 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 AFF3P51826 1226 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 YWHAGP61981 247 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 ARID5AQ03989 594 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 RING1Q06587 406 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 ZNF234Q14588 700 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 COBLL1Q53SF7 1204 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 CEP135Q66GS9 1140 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 USP30Q70CQ3 517 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 FAM186BQ8IYM0 893 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 AHI1Q8N157 1196 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 CACTIN-AS1Q8N1I8 211 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 C1orf216Q8TAB5 229 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 KCTD13Q8WZ19 329 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 IRGQQ8WZA9 623 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 SKA1Q96BD8 255 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 TWNKQ96RR1 684 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 TM7SF3Q9NS93 570 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 GPSM3Q9Y4H4 160 aa11.76□□□□□ -0.53
SMARCE1-214ENST00000578112 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 KLKB1P03952 638 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 ASLP04424 464 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 C1SP09871 688 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 SETSIPP0DME0 302 aa11.75□□□□□ -0.53
SMARCE1-214ENST00000578112 HARS2P49590 506 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms