RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PCDHB7Q9Y5E2 793 aa28.68■■■□□ 2.18
LIMD2-203ENST00000578067 CHADO15335 359 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 BSPRYQ5W0U4 402 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 TAOK1Q7L7X3 1001 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 ABI1Q8IZP0 508 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 PDIK1LQ8N165 341 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 RAB6BQ9NRW1 208 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.67■■■□□ 2.187e-7■■□□□ 13.5
LIMD2-203ENST00000578067 MFHAS1Q9Y4C4 1052 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 CREB3O43889 395 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 MSS51Q4VC12 460 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 LRRN4Q8WUT4 740 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 VPS37BQ9H9H4 285 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 LGALS13Q9UHV8 139 aa28.67■■■□□ 2.18
LIMD2-203ENST00000578067 HACD1B0YJ81 288 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 E7EVH7 732 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 EEF2KO00418 725 aaKnown RBP28.66■■■□□ 2.18
LIMD2-203ENST00000578067 PITPNM1O00562 1244 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 CDH16O75309 829 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 TADA2AO75478 443 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 BANF1O75531 89 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 DGKIO75912 1065 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 PPP1R21Q6ZMI0 780 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 ANKMY2Q8IV38 441 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 PYROXD1Q8WU10 500 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 SEPT8Q92599 483 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 OLFM3Q96PB7 478 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 TRIM62Q9BVG3 475 aa28.66■■■□□ 2.18
LIMD2-203ENST00000578067 ZMYND8Q9ULU4 1186 aaPredicted RBP28.66■■■□□ 2.18
LIMD2-203ENST00000578067 PPARDQ03181 441 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 ARL13BQ3SXY8 428 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 EXOC3L1Q86VI1 746 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 DCP1BQ8IZD4 617 aaKnown RBP28.65■■■□□ 2.18
LIMD2-203ENST00000578067 SELENOSQ9BQE4 189 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 COLEC11Q9BWP8 271 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 ZCWPW1Q9H0M4 648 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 PAK6Q9NQU5 681 aaPredicted RBP28.65■■■□□ 2.18
LIMD2-203ENST00000578067 CTNNAL1Q9UBT7 734 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 SRRM3A6NNA2 597 aaPredicted RBP28.65■■■□□ 2.18
LIMD2-203ENST00000578067 GCATO75600 419 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 OR4Q2P0C623 313 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 GRIK1P39086 918 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 CCDC38Q502W7 563 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 SLC39A12Q504Y0 691 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 FAM43BQ6ZT52 329 aaPredicted RBP28.65■■■□□ 2.18
LIMD2-203ENST00000578067 RFX8Q6ZV50 586 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 BEND5Q7L4P6 421 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 SCAMP5Q8TAC9 235 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 BCAS4Q8TDM0 211 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 ARHGEF2Q92974 986 aaKnown RBP28.65■■■□□ 2.18
LIMD2-203ENST00000578067 KLC2Q9H0B6 622 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 EPN3Q9H201 632 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 ANLNQ9NQW6 1124 aa28.65■■■□□ 2.18
LIMD2-203ENST00000578067 SF3B1O75533 1304 aaKnown RBP eCLIP28.65■■■□□ 2.18
LIMD2-203ENST00000578067 NLRC5Q86WI3 1866 aa28.64■■■□□ 2.18
LIMD2-203ENST00000578067 EXOC1LA0A1B0GW35 172 aa28.64■■■□□ 2.18
LIMD2-203ENST00000578067 DPYSQ14117 519 aa28.64■■■□□ 2.18
LIMD2-203ENST00000578067 HEATR6Q6AI08 1181 aaKnown RBP28.64■■■□□ 2.18
LIMD2-203ENST00000578067 RIBC1Q8N443 379 aaPredicted RBP28.64■■■□□ 2.18
LIMD2-203ENST00000578067 CCDC110Q8TBZ0 833 aa28.64■■■□□ 2.18
LIMD2-203ENST00000578067 TFB1MQ8WVM0 346 aaKnown RBP28.64■■■□□ 2.18
LIMD2-203ENST00000578067 DEFB118Q96PH6 123 aa28.64■■■□□ 2.18
LIMD2-203ENST00000578067 C5orf60A6NFR6 353 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 SYN3O14994 580 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 MFSD11O43934 449 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 MYCP01106 439 aaPredicted RBP28.64■■■□□ 2.17
LIMD2-203ENST00000578067 CXCR3P49682 368 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 BBS9Q3SYG4 887 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 CCDC33Q8N5R6 958 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 ATP11CQ8NB49 1132 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 MDM1Q8TC05 714 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 APBB2Q92870 758 aa28.64■■■□□ 2.17
LIMD2-203ENST00000578067 FRMD8Q9BZ67 464 aaPredicted RBP28.64■■■□□ 2.17
LIMD2-203ENST00000578067 COL4A4P53420 1690 aaPredicted RBP28.63■■■□□ 2.17
LIMD2-203ENST00000578067 MAGEA6P43360 314 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 SLC5A3P53794 718 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 GPX6P59796 221 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 SEMA3BQ13214 749 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 PAFAH1B3Q15102 231 aaKnown RBP28.63■■■□□ 2.17
LIMD2-203ENST00000578067 FBXO36Q8NEA4 188 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 CASD1Q96PB1 797 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 WDCPQ9H6R7 721 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 EURLQ9NYK6 297 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 LRFN2Q9ULH4 789 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 PTPRDP23468 1912 aa28.63■■■□□ 2.17
LIMD2-203ENST00000578067 FAM72CH0Y354 149 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 I6L893 689 aaPredicted RBP28.62■■■□□ 2.17
LIMD2-203ENST00000578067 TNFRSF10BO14763 440 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 PHBP35232 272 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 HCAR3P49019 387 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 FAM182AQ5T1J6 154 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 FAM72AQ5TYM5 149 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 FAM72DQ6L9T8 149 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 CAPN12Q6ZSI9 719 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 FAM72BQ86X60 149 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 CENPTQ96BT3 561 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 ETNK1Q9HBU6 452 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 CLUHO75153 1309 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 DCLK1O15075 740 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 CBLBQ13191 982 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms